RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CDC73Q6P1J9 531 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 TAF8Q7Z7C8 310 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 MKL1Q969V6 931 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 OXCT2Q9BYC2 517 aaPredicted RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 KLHL25Q9H0H3 589 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 LOC100506127A0A0U1RQW1 187 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 LYPLA1O75608 230 aaPredicted RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 PRG2P13727 222 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 ERVK-21P61565 698 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 ACAP1Q15027 740 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 TCEAL5Q5H9L2 206 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 TMPRSS11BQ86T26 416 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 LDB1Q86U70 411 aaPredicted RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 NKAPQ8N5F7 415 aaKnown RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 NKX2-3Q8TAU0 364 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 MAGEE2Q8TD90 523 aaPredicted RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 TP53INP1Q96A56 240 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 COQ7Q99807 217 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 TNPO3Q9Y5L0 923 aaKnown RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 FAM58BPP0C7Q3 252 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 RAB10P61026 200 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 FKBP1CQ5VVH2 108 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 ZNF557Q8N988 423 aaPredicted RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 JOSD2Q8TAC2 188 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 MECRQ9BV79 373 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 PRDM12Q9H4Q4 367 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 ATAD3AQ9NVI7 634 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 SUCOQ9UBS9 1254 aaKnown RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 RPTORQ8N122 1335 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 KIF1AQ12756 1690 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 URADA6NGE7 173 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 TEX28O15482 410 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 SMPD1P17405 629 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 TKTP29401 623 aaKnown RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 TMED10P49755 219 aaKnown RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 FMO1Q01740 532 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 PRKG2Q13237 762 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 LPCAT2Q7L5N7 544 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 PRSS58Q8IYP2 241 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 CAVIN3Q969G5 261 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 DTNBP1Q96EV8 351 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 KCTD15Q96SI1 283 aaPredicted RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 MRPS26Q9BYN8 205 aaKnown RBP11.24□□□□□ -0.61
LINC00346-201ENST00000538077 DAPK2Q9UIK4 370 aa11.24□□□□□ -0.61
LINC00346-201ENST00000538077 ARL5CA6NH57 179 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 OR2AG2A6NM03 316 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 C9IYK1 514 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 SLC28A1O00337 649 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 CLPTM1O96005 669 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 ITGB5P18084 799 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 LPOP22079 712 aaPredicted RBP11.23□□□□□ -0.61
LINC00346-201ENST00000538077 PIK3R1P27986 724 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 ADSLP30566 484 aaPredicted RBP11.23□□□□□ -0.61
LINC00346-201ENST00000538077 SLC5A3P53794 718 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 GJA9P57773 515 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 ARMC4Q5T2S8 1044 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 WDR93Q6P2C0 686 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 SLC30A9Q6PML9 568 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 RPTNQ6XPR3 784 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 KIFC1Q9BW19 673 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 AXIN1O15169 862 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 TAS2R41P59536 307 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 FOXM1Q08050 763 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 STARD8Q92502 1023 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 MON2Q7Z3U7 1717 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 CLOCKO15516 846 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 IDH3BO43837 385 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 MATN4O95460 622 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 SLC25A3Q00325 362 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 CDK16Q00536 496 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 ZNF549Q6P9A3 640 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 UTS2BQ765I0 119 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 C10orf107Q8IVU9 208 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 NEK7Q8TDX7 302 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 AUTS2Q8WXX7 1259 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 PTPN18Q99952 460 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 AGO3Q9H9G7 860 aaKnown RBP11.23□□□□□ -0.61
LINC00346-201ENST00000538077 GDF3Q9NR23 364 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 PSME2Q9UL46 239 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 ATP6AP2A0A1C7CYW4 349 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 EPHB6O15197 1021 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 ATP6AP2O75787 350 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 TOP3BO95985 862 aaKnown RBP11.23□□□□□ -0.61
LINC00346-201ENST00000538077 C1RP00736 705 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 ERCC2P18074 760 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 TM4SF1P30408 202 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 GRIA3P42263 894 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 GPRIN3Q6ZVF9 776 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 TOP6BLQ8N6T0 577 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 BPIFB6Q8NFQ5 453 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 ZNF510Q9Y2H8 683 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 E9PAM4 449 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 RNASE12Q5GAN4 147 aaKnown RBP11.23□□□□□ -0.61
LINC00346-201ENST00000538077 ARL14EPQ8N8R7 260 aaPredicted RBP11.23□□□□□ -0.61
LINC00346-201ENST00000538077 ZCCHC10Q8TBK6 192 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 PMM1Q92871 262 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 VPS35Q96QK1 796 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 SYT17Q9BSW7 474 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 CDADC1Q9BWV3 514 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms