RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 SPATA5L1Q9BVQ7 753 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 ZNF518BQ9C0D4 1074 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 BOLA2Q9H3K6 86 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 ZNF302Q9NR11 478 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 ETAA1Q9NY74 926 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 HSFX1Q9UBD0 423 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 MAFFQ9ULX9 164 aa6.87□□□□□ -1.31
CCDC60-203ENST00000536742 IGHV1OR15-9A0A0B4J2B8 117 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 MYO1CO00159 1063 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 TBX3O15119 743 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 VPS4BO75351 444 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 DNAJB5O75953 348 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 UNC5CO95185 931 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 CLDN1O95832 211 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 GRPP07492 148 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 ELANEP08246 267 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 BRAFP15056 766 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 FDXRP22570 491 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 U2AF2P26368 475 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 ACADVLP49748 655 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 CCT8P50990 548 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 RPS7P62081 194 aaKnown RBP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 GUCY1B3Q02153 619 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 HDAC1Q13547 482 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 PDGFRLQ15198 375 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 CYP2A13Q16696 494 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 LSM12Q3MHD2 195 aaKnown RBP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 ARHGAP15Q53QZ3 475 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 LY6G5CQ5SRR4 150 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 ZNF410Q86VK4 478 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 CLASRPQ8N2M8 674 aaKnown RBP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 LRRC71Q8N4P6 559 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 Q8NA96 180 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 CPEB3Q8NE35 698 aaKnown RBP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 ZNF483Q8TF39 744 aaPredicted RBP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 CUL5Q93034 780 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 CNDP2Q96KP4 475 aaKnown RBP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 ZSWIM1Q9BR11 485 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 ALOXE3Q9BYJ1 711 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 UNKQ9C0B0 810 aaKnown RBP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 POLR1BQ9H9Y6 1135 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 LY9Q9HBG7 655 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 AGPAT5Q9NUQ2 364 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 MIOSQ9NXC5 875 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 CTTNBP2NLQ9P2B4 639 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 AFF4Q9UHB7 1163 aaKnown RBP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 USP25Q9UHP3 1055 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 ITGB1BP2Q9UKP3 347 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 VPS4AQ9UN37 437 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 UBIAD1Q9Y5Z9 338 aa6.86□□□□□ -1.31
CCDC60-203ENST00000536742 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC60-203ENST00000536742 FBN1P35555 2871 aaKnown RBP6.85□□□□□ -1.31
CCDC60-203ENST00000536742 UBE4BO95155 1302 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 A0A087WWL8 130 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 TCRBV21S2A2A0A5A6 115 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 K7EQS6 105 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 M0QYG6 137 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 BTN3A1O00481 513 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 BCAT2O15382 392 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-203ENST00000536742 PAPSS1O43252 624 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-203ENST00000536742 DFNA5O60443 496 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 NDUFA10O95299 355 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 PARP1P09874 1014 aaKnown RBP6.85□□□□□ -1.31
CCDC60-203ENST00000536742 MAKP20794 623 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 NR4A1P22736 598 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 VAV2P52735 878 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 ROR1Q01973 937 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 TWF1Q12792 350 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 GRIK3Q13003 919 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 RESTQ13127 1097 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 TPGS2Q68CL5 300 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 SLC8B1Q6J4K2 584 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 MIS18BP1Q6P0N0 1132 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 KDM7AQ6ZMT4 941 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 TMPRSS9Q7Z410 1059 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 HACE1Q8IYU2 909 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 ZCCHC9Q8N567 271 aaKnown RBP6.85□□□□□ -1.31
CCDC60-203ENST00000536742 POLR3CQ9BUI4 534 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-203ENST00000536742 ASCL3Q9NQ33 180 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 ECHDC1Q9NTX5 307 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 HESX1Q9UBX0 185 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 ANAPC4Q9UJX5 808 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 HS3ST4Q9Y661 456 aa6.85□□□□□ -1.31
CCDC60-203ENST00000536742 ARHGEF17Q96PE2 2063 aaPredicted RBP6.85□□□□□ -1.31
CCDC60-203ENST00000536742 A0A087WZ62 844 aa6.84□□□□□ -1.31
CCDC60-203ENST00000536742 MBD3L4A6NDZ8 208 aaPredicted RBP6.84□□□□□ -1.31
CCDC60-203ENST00000536742 MBD3L3A6NE82 208 aaPredicted RBP6.84□□□□□ -1.31
CCDC60-203ENST00000536742 MEI4A8MW99 385 aa6.84□□□□□ -1.31
CCDC60-203ENST00000536742 SUN1O94901 812 aa6.84□□□□□ -1.31
CCDC60-203ENST00000536742 KLF8O95600 359 aaPredicted RBP6.84□□□□□ -1.31
CCDC60-203ENST00000536742 MT-CO3P00414 261 aa6.84□□□□□ -1.31
CCDC60-203ENST00000536742 ZFYP08048 801 aaPredicted RBP6.84□□□□□ -1.31
CCDC60-203ENST00000536742 RBMS1P29558 406 aaKnown RBP6.84□□□□□ -1.31
CCDC60-203ENST00000536742 SLC11A2P49281 568 aa6.84□□□□□ -1.31
CCDC60-203ENST00000536742 PTTG1IPP53801 180 aa6.84□□□□□ -1.31
CCDC60-203ENST00000536742 E2F1Q01094 437 aa6.84□□□□□ -1.31
CCDC60-203ENST00000536742 FMO1Q01740 532 aa6.84□□□□□ -1.31
CCDC60-203ENST00000536742 BNC1Q01954 994 aa6.84□□□□□ -1.31
CCDC60-203ENST00000536742 ST3GAL1Q11201 340 aa6.84□□□□□ -1.31
CCDC60-203ENST00000536742 SLC13A2Q13183 592 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms