RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 LONRF2Q1L5Z9 754 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 HS1BP3Q53T59 392 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 SEL1L3Q68CR1 1132 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 PSAPL1Q6NUJ1 521 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 PID1Q7Z2X4 250 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 PIP4P1Q86T03 277 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.62□□□□□ -0.23
RPAIN-205ENST00000536255 MFSD2AQ8NA29 543 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 ARRDC2Q8TBH0 407 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 PPP1R2P1Q96PQ5 205 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 FAM118BQ9BPY3 351 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 CEP41Q9BYV8 373 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 GLOD4Q9HC38 313 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 HOMER3Q9NSC5 361 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 PHTF1Q9UMS5 762 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 ZFR2Q9UPR6 939 aaKnown RBP13.62□□□□□ -0.23
RPAIN-205ENST00000536255 RAI2Q9Y5P3 530 aa13.62□□□□□ -0.23
RPAIN-205ENST00000536255 TCRBV7S2A1N4TA0A589 114 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 CES2O00748 559 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 AREL1O15033 823 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 SLC31A1O15431 190 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 SPINT1O43278 529 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 PGLSO95336 258 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 CPP00450 1065 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 ATP1A1P05023 1023 aaKnown RBP13.61□□□□□ -0.23
RPAIN-205ENST00000536255 CEACAM1P13688 526 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 TCP1P17987 556 aaKnown RBP13.61□□□□□ -0.23
RPAIN-205ENST00000536255 STIP1P31948 543 aaKnown RBP13.61□□□□□ -0.23
RPAIN-205ENST00000536255 TNNT3P45378 269 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-205ENST00000536255 EPHB1P54762 984 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 NXPH1P58417 271 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 RPL26P61254 145 aaKnown RBP13.61□□□□□ -0.23
RPAIN-205ENST00000536255 NIPAL4Q0D2K0 466 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 TRAF2Q12933 501 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 STAT4Q14765 748 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 IQCHQ86VS3 1027 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 ZNF567Q8N184 647 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 TMEM145Q8NBT3 493 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 DEFB124Q8NES8 71 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 SLC35B2Q8TB61 432 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 CXorf40AQ8TE69 158 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 KLK6Q92876 244 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 IMP4Q96G21 291 aaKnown RBP13.61□□□□□ -0.23
RPAIN-205ENST00000536255 OSBPL9Q96SU4 736 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 NAPGQ99747 312 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-205ENST00000536255 SLC32A1Q9H598 525 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 TM7SF3Q9NS93 570 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 GGT7Q9UJ14 662 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 DNPEPQ9ULA0 475 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 TTC7AQ9ULT0 858 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-205ENST00000536255 SNX12Q9UMY4 172 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 RPL26L1Q9UNX3 145 aaKnown RBP13.61□□□□□ -0.23
RPAIN-205ENST00000536255 ITM2BQ9Y287 266 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 R3HDM2Q9Y2K5 976 aaKnown RBP13.61□□□□□ -0.23
RPAIN-205ENST00000536255 PCDHB9Q9Y5E1 797 aa13.61□□□□□ -0.23
RPAIN-205ENST00000536255 CTAGE9A4FU28 777 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 H0Y8X5 98 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 TLR4O00206 839 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 RIOK3O14730 519 aaKnown RBP13.6□□□□□ -0.23
RPAIN-205ENST00000536255 LIASO43766 372 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 DFNA5O60443 496 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 CYP2A6P11509 494 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-205ENST00000536255 HNRNPA2B1P22626 353 aaKnown RBP13.6□□□□□ -0.23
RPAIN-205ENST00000536255 AKT2P31751 481 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 ACTN2P35609 894 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 FAM193AP78312 1265 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 OVGP1Q12889 678 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 SGCGQ13326 291 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 CCNG2Q16589 344 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 ZNF423Q2M1K9 1284 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 LRRC73Q5JTD7 316 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 ANKRD20A2Q5SQ80 823 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 ANKRD20A1Q5TYW2 823 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 ANKRD20A3Q5VUR7 823 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 USP45Q70EL2 814 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 NAXDQ8IW45 347 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 RASGEF1CQ8N431 466 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 SPATA13Q96N96 652 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 FCRL5Q96RD9 977 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 RBM15Q96T37 977 aaKnown RBP eCLIP13.6□□□□□ -0.23
RPAIN-205ENST00000536255 MYOCQ99972 504 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 TDRD1Q9BXT4 1180 aaKnown RBP13.6□□□□□ -0.23
RPAIN-205ENST00000536255 ADGRE3Q9BY15 652 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 SLC17A9Q9BYT1 436 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 USP29Q9HBJ7 922 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 PCDH9Q9HC56 1237 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 FZD3Q9NPG1 666 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 PCDH12Q9NPG4 1184 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 GDF3Q9NR23 364 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 FAM153AQ9UHL3 310 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 RSPH14Q9UHP6 348 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 CA5BQ9Y2D0 317 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 PCDHGB2Q9Y5G2 931 aa13.6□□□□□ -0.23
RPAIN-205ENST00000536255 ASCC3Q8N3C0 2202 aaKnown RBP13.59□□□□□ -0.23
RPAIN-205ENST00000536255 GOLGA6CA6NDK9 693 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 GOLGA6BA6NDN3 693 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 C5orf60A6NFR6 353 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 IGLON5A6NGN9 336 aa13.59□□□□□ -0.23
RPAIN-205ENST00000536255 PGRMC1O00264 195 aaKnown RBP13.59□□□□□ -0.23
RPAIN-205ENST00000536255 GIPC1O14908 333 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms