RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CXorf40AQ8TE69 158 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 OXNAD1Q96HP4 312 aaPredicted RBP17.97■□□□□ 0.47
DDX55-204ENST00000536079 TRIB3Q96RU7 358 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 GTPBP2Q9BX10 602 aaKnown RBP17.97■□□□□ 0.47
DDX55-204ENST00000536079 CARD9Q9H257 536 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 MBNL1Q9NR56 388 aaKnown RBP17.97■□□□□ 0.47
DDX55-204ENST00000536079 KLHL8Q9P2G9 620 aaPredicted RBP17.97■□□□□ 0.47
DDX55-204ENST00000536079 DNPEPQ9ULA0 475 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 PHTF1Q9UMS5 762 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 DMTF1Q9Y222 760 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 PPIL1Q9Y3C6 166 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 ADAMTS9Q9P2N4 1935 aa17.97■□□□□ 0.47
DDX55-204ENST00000536079 POM121BA6NF01 834 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 PRR5-ARHGAP8B1AHC4 643 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 PRAMEF26H0Y7S4 382 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 VILLO15195 856 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 KCNN4O15554 427 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 HNRNPA2B1P22626 353 aaKnown RBP17.96■□□□□ 0.47
DDX55-204ENST00000536079 CD38P28907 300 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 HNF1BP35680 557 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 GRIA4P48058 902 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 GDF10P55107 478 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 ELP6Q0PNE2 266 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 QPCTQ16769 361 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 KCTD19Q17RG1 926 aaPredicted RBP17.96■□□□□ 0.47
DDX55-204ENST00000536079 TPRG1LQ5T0D9 272 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 ERAP2Q6P179 960 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 KDELC1Q6UW63 502 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 RABEPKQ7Z6M1 372 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 CDKL3Q8IVW4 592 aaPredicted RBP17.96■□□□□ 0.47
DDX55-204ENST00000536079 CBARPQ8N350 705 aaPredicted RBP17.96■□□□□ 0.47
DDX55-204ENST00000536079 PAF1Q8N7H5 531 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 TP53I13Q8NBR0 393 aaPredicted RBP17.96■□□□□ 0.47
DDX55-204ENST00000536079 LPCAT1Q8NF37 534 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 CCDC110Q8TBZ0 833 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 C1orf54Q8WWF1 131 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 CENPTQ96BT3 561 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 PCDH9Q9HC56 1237 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 PI4KAP42356 2102 aa17.96■□□□□ 0.47
DDX55-204ENST00000536079 C4orf47A7E2U8 309 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 PMPCBO75439 489 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 TM7SF2O76062 418 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 VIPR1P32241 457 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 IGFALSP35858 605 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 CTSKP43235 329 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 POLR2LP62875 67 aaKnown RBP17.95■□□□□ 0.46
DDX55-204ENST00000536079 LMNB2Q03252 620 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 SGCGQ13326 291 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 GALNT3Q14435 633 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 CNGA3Q16281 694 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 PCSK7Q16549 785 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 RSPO4Q2I0M5 234 aaPredicted RBP17.95■□□□□ 0.46
DDX55-204ENST00000536079 ANKRD20A2Q5SQ80 823 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 STPG1Q5TH74 334 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 ANKRD20A1Q5TYW2 823 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 ANKRD20A3Q5VUR7 823 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 PELI3Q8N2H9 469 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 MINDY1Q8N5J2 469 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 FAM71DQ8N9W8 422 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 OR13H1Q8NG92 308 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 UBE2Q2Q8WVN8 375 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 ASB12Q8WXK4 309 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 SCRN2Q96FV2 425 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 LENG8Q96PV6 779 aaPredicted RBP17.95■□□□□ 0.46
DDX55-204ENST00000536079 MCCC1Q96RQ3 725 aaPredicted RBP17.95■□□□□ 0.46
DDX55-204ENST00000536079 SMARCAL1Q9NZC9 954 aa17.95■□□□□ 0.46
DDX55-204ENST00000536079 TPX2Q9ULW0 747 aaKnown RBP17.95■□□□□ 0.46
DDX55-204ENST00000536079 TRPM6Q9BX84 2022 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 DNAH14Q0VDD8 3507 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 A0A0J9YYE9 177 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 GOLGA6L9A6NEM1 432 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 TLR4O00206 839 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 MTSS1O43312 755 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 LIASO43766 372 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 CEP104O60308 925 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 HEXIM1O94992 359 aaKnown RBP17.94■□□□□ 0.46
DDX55-204ENST00000536079 TRBC1P01850 177 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 AKT2P31751 481 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 NUDT1P36639 197 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 NXPH1P58417 271 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 SNX1Q13596 522 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 STAT4Q14765 748 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 CDKN3Q16667 212 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 WSCD2Q2TBF2 565 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 HLA-BQ31612 363 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 CRTC1Q6UUV9 634 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 NYAP1Q6ZVC0 841 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 HSD11B1LQ7Z5J1 315 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 ABI3BPQ7Z7G0 1075 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 PRUNE1Q86TP1 453 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 SLC22A18ASQ8N1D0 253 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 MFSD2AQ8NA29 543 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 TTC13Q8NBP0 860 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 FUBP1Q96AE4 644 aaKnown RBP17.94■□□□□ 0.46
DDX55-204ENST00000536079 RMDN1Q96DB5 314 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 MS4A14Q96JA4 679 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 FCRL5Q96RD9 977 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 VAT1Q99536 393 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 TMEM121Q9BTD3 319 aa17.94■□□□□ 0.46
DDX55-204ENST00000536079 MLPHQ9BV36 600 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms