RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 PCED1AQ9H1Q7 454 aa16.32■□□□□ 0.2
VAMP1-205ENST00000535927 SGK2Q9HBY8 427 aa16.32■□□□□ 0.2
VAMP1-205ENST00000535927 MRM3Q9HC36 420 aaKnown RBP16.32■□□□□ 0.2
VAMP1-205ENST00000535927 ZDHHC4Q9NPG8 344 aa16.32■□□□□ 0.2
VAMP1-205ENST00000535927 SARDHQ9UL12 918 aa16.32■□□□□ 0.2
VAMP1-205ENST00000535927 ZDBF2Q9HCK1 2354 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 TTC24A2A3L6 582 aaPredicted RBP16.31■□□□□ 0.2
VAMP1-205ENST00000535927 HEATR9A2RTY3 570 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 CAPN8A6NHC0 703 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 PDHA1P08559 390 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 ADRB3P13945 408 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 GABRG2P18507 467 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 ADRA1DP25100 572 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 NUDT1P36639 197 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 PSMD8P48556 350 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 SLMAPQ14BN4 828 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 HIF1AQ16665 826 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 PCID2Q5JVF3 399 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 LPCAT1Q8NF37 534 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 SERPINB12Q96P63 405 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 ZDHHC18Q9NUE0 388 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 FBXL12Q9NXK8 326 aa16.31■□□□□ 0.2
VAMP1-205ENST00000535927 USP36Q9P275 1121 aaKnown RBP16.31■□□□□ 0.2
VAMP1-205ENST00000535927 C2orf81A6NN90 581 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 E7ESA3 106 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 AREL1O15033 823 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 MID1O15344 667 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 TP73O15350 636 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 CTIFO43310 598 aaKnown RBP16.3■□□□□ 0.2
VAMP1-205ENST00000535927 TMEM63AO94886 807 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 TTC4O95801 387 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 DCNP07585 359 aaKnown RBP16.3■□□□□ 0.2
VAMP1-205ENST00000535927 NDUFV2P19404 249 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 GKP32189 559 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 HLTFQ14527 1009 aaKnown RBP eCLIP16.3■□□□□ 0.2
VAMP1-205ENST00000535927 TAF1AQ15573 450 aaPredicted RBP16.3■□□□□ 0.2
VAMP1-205ENST00000535927 ERCC6LQ2NKX8 1250 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 TMEM52BQ4KMG9 183 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 ANKRD22Q5VYY1 191 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 PKN3Q6P5Z2 889 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 CCNI2Q6ZMN8 369 aaPredicted RBP16.3■□□□□ 0.2
VAMP1-205ENST00000535927 DPPA4Q7L190 304 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 C11orf74Q86VG3 221 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 CAND1Q86VP6 1230 aaKnown RBP16.3■□□□□ 0.2
VAMP1-205ENST00000535927 CNPY4Q8N129 248 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 HDDC3Q8N4P3 179 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 LRRN4CLQ8ND94 238 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 MYRIPQ8NFW9 859 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 OR52K1Q8NGK4 314 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 FBXO25Q8TCJ0 367 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 DTX3LQ8TDB6 740 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 ASB12Q8WXK4 309 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 IFT81Q8WYA0 676 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 ARRDC3Q96B67 414 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 FMO2Q99518 471 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 ANKZF1Q9H8Y5 726 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 PREBQ9HCU5 417 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 BCCIPQ9P287 314 aaKnown RBP eCLIP16.3■□□□□ 0.2
VAMP1-205ENST00000535927 FBXO4Q9UKT5 387 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 RAB21Q9UL25 225 aa16.3■□□□□ 0.2
VAMP1-205ENST00000535927 ANTXRLA6NF34 631 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 LRRC72A6NJI9 287 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 LAMTOR5O43504 91 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 GJB3O75712 270 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 GSTA2P09210 222 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 TSHRP16473 764 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 PSMA3P25788 255 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 VIPR1P32241 457 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 DRD3P35462 400 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 HMGCLP35914 325 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 P2RY2P41231 377 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 TERF1P54274 439 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 MRPS25P82663 173 aaKnown RBP16.29■□□□□ 0.2
VAMP1-205ENST00000535927 CNTN1Q12860 1018 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 MSLNQ13421 630 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-205ENST00000535927 ARHGEF7Q14155 803 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 SPARCL1Q14515 664 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 MAP7D1Q3KQU3 841 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 MAP9Q49MG5 647 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 PARS2Q7L3T8 475 aaKnown RBP16.29■□□□□ 0.2
VAMP1-205ENST00000535927 NLRP8Q86W28 1048 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 PGBD3Q8N328 593 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 TAB3Q8N5C8 712 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-205ENST00000535927 SLC25A41Q8N5S1 370 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 HMGB4Q8WW32 186 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 ZFYVE1Q9HBF4 777 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 PRMT8Q9NR22 394 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-205ENST00000535927 SPATA6Q9NWH7 488 aaPredicted RBP16.29■□□□□ 0.2
VAMP1-205ENST00000535927 SAMD15Q9P1V8 674 aa16.29■□□□□ 0.2
VAMP1-205ENST00000535927 FAM237BA0A1B0GVD1 139 aa16.28■□□□□ 0.2
VAMP1-205ENST00000535927 TCRBV7S3A2A0A539 114 aa16.28■□□□□ 0.2
VAMP1-205ENST00000535927 PLRG1O43660 514 aaKnown RBP16.28■□□□□ 0.2
VAMP1-205ENST00000535927 LPOP22079 712 aaPredicted RBP16.28■□□□□ 0.2
VAMP1-205ENST00000535927 HNF1BP35680 557 aa16.28■□□□□ 0.2
VAMP1-205ENST00000535927 MMP12P39900 470 aa16.28■□□□□ 0.2
VAMP1-205ENST00000535927 HADHAP40939 763 aa16.28■□□□□ 0.2
VAMP1-205ENST00000535927 TPMTP51580 245 aa16.28■□□□□ 0.2
VAMP1-205ENST00000535927 CREB5Q02930 508 aa16.28■□□□□ 0.2
VAMP1-205ENST00000535927 AGERQ15109 404 aa16.28■□□□□ 0.2
VAMP1-205ENST00000535927 SKIDA1Q1XH10 827 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms