RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 TSPAN8P19075 237 aa18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 SLC12A2P55011 1212 aa18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 SLC12A1Q13621 1099 aa18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 FRG1Q14331 258 aaKnown RBP18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 LRRC8EQ6NSJ5 796 aa18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 KLHDC10Q6PID8 442 aa18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 FAM43BQ6ZT52 329 aaPredicted RBP18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 POU5F2Q8N7G0 328 aa18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 OR4K2Q8NGD2 314 aa18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 RIN3Q8TB24 985 aa18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 TRMT2BQ96GJ1 504 aaKnown RBP18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 TCF25Q9BQ70 676 aa18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 ARHGEF3Q9NR81 526 aa18.36■□□□□ 0.53
HTATSF1-204ENST00000535601 DENND4CQ5VZ89 1909 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 FBXO46Q6PJ61 603 aaPredicted RBP18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 CCDC91Q7Z6B0 441 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 SUGP1Q8IWZ8 645 aaKnown RBP18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 PARP9Q8IXQ6 854 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 FIBCD1Q8N539 461 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 OVCA2Q8WZ82 227 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 GPR78Q96P69 363 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 PSKH2Q96QS6 385 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 TBC1D10AQ9BXI6 508 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 MEI4A8MW99 385 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 LILRB3O75022 631 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 LRG1P02750 347 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 CCDC166P0CW27 439 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 GRIA4P48058 902 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 TRAF2Q12933 501 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 INSCQ1MX18 579 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 CCDC153Q494R4 210 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 RINLQ6ZS11 566 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 NECAB2Q7Z6G3 386 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 PPP4R1Q8TF05 950 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 TRIB3Q96RU7 358 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 FEM1AQ9BSK4 669 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 TXLNGQ9NUQ3 528 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 VPS51Q9UID3 782 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 RAI2Q9Y5P3 530 aa18.35■□□□□ 0.53
HTATSF1-204ENST00000535601 UBA6A0AVT1 1052 aaPredicted RBP18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 ILVBLA1L0T0 632 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 PRR5-ARHGAP8B1AHC4 643 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 DLX3O60479 287 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 ARHGEF15O94989 841 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 JUNP05412 331 aaKnown RBP18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 EN2P19622 333 aaPredicted RBP18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 ARHGAP8P85298 464 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 GPR158Q5T848 1215 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 LONP2Q86WA8 852 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 PHF21BQ96EK2 531 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 PRKD2Q9BZL6 878 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 TNKS2Q9H2K2 1166 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 S1PR4O95977 384 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 ALPIP09923 528 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 NTHL1P78549 312 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 HECTD2Q5U5R9 776 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 MICAL1Q8TDZ2 1067 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 CCDC97Q96F63 343 aaPredicted RBP18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 FAM167BQ9BTA0 163 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 MRM3Q9HC36 420 aaKnown RBP18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 GPAMQ9HCL2 828 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 HCFC2Q9Y5Z7 792 aa18.34■□□□□ 0.53
HTATSF1-204ENST00000535601 HNRNPLP14866 589 aaKnown RBP eCLIP18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 KCNC1P48547 511 aa18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 UGP2Q16851 508 aa18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 ZNF549Q6P9A3 640 aa18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 GLT6D1Q7Z4J2 308 aa18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 MFN1Q8IWA4 741 aa18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 TXNDC5Q8NBS9 432 aaKnown RBP18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 SHKBP1Q8TBC3 707 aa18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 FEM1CQ96JP0 617 aa18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 WDR55Q9H6Y2 383 aaPredicted RBP18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 KCNK4Q9NYG8 393 aa18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 TBC1D30Q9Y2I9 924 aa18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 PCDHB9Q9Y5E1 797 aa18.33■□□□□ 0.53
HTATSF1-204ENST00000535601 E9PBE3 544 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 KLHL41O60662 606 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 TRIM13O60858 407 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 PIGNO95427 931 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 CSRP3P50461 194 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 SLC9B1Q4ZJI4 515 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 CAMK1DQ8IU85 385 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 PAF1Q8N7H5 531 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 KREMEN2Q8NCW0 462 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 PTCD2Q8WV60 388 aaKnown RBP18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 TSNARE1Q96NA8 513 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 OXSMQ9NWU1 459 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 L3MBTL1Q9Y468 752 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 KIAA0355O15063 1070 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 CD3EAPO15446 510 aaKnown RBP18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 ZMPSTE24O75844 475 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 NDST3O95803 873 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 CTSAP10619 480 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 CR2P20023 1033 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 RFC2P35250 354 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 IRS1P35568 1242 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 CTSOP43234 321 aaPredicted RBP18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 STK19P49842 368 aaPredicted RBP18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 E2F5Q15329 346 aa18.33■□□□□ 0.52
HTATSF1-204ENST00000535601 CMTM8Q8IZV2 173 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms