RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 HOXC11O43248 304 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-205ENST00000535375 KLK8O60259 260 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 TIPRLO75663 272 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 MMP2P08253 660 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 EDN2P20800 178 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 HNRNPH1P31943 449 aaKnown RBP5.17□□□□□ -1.58
PRKDC-205ENST00000535375 GALNT2Q10471 571 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 AMZ1Q400G9 498 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 PPP6R3Q5H9R7 873 aaPredicted RBP5.17□□□□□ -1.58
PRKDC-205ENST00000535375 WBP2NLQ6ICG8 309 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 TDRPQ86YL5 185 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 DSELQ8IZU8 1212 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 C3orf30Q96M34 536 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 H2AFJQ9BTM1 129 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 ZNF556Q9HAH1 456 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 SMARCAL1Q9NZC9 954 aa5.17□□□□□ -1.58
PRKDC-205ENST00000535375 NCAM2O15394 837 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 CAMTA2O94983 1202 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 ITGAXP20702 1163 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 GRIK3Q13003 919 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 ZNF718Q3SXZ3 478 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 ZNF672Q499Z4 452 aaPredicted RBP5.16□□□□□ -1.58
PRKDC-205ENST00000535375 B3GNT6Q6ZMB0 384 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 NOXA1Q86UR1 476 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 BEST2Q8NFU1 509 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 DNASE2BQ8WZ79 361 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 KLHL15Q96M94 604 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 IL17FQ96PD4 163 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 CSF3RQ99062 836 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 NOX4Q9NPH5 578 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 TXLNGQ9NUQ3 528 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 GGA3Q9NZ52 723 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 HSPB7Q9UBY9 170 aa5.16□□□□□ -1.58
PRKDC-205ENST00000535375 LSM4Q9Y4Z0 139 aaKnown RBP5.16□□□□□ -1.58
PRKDC-205ENST00000535375 LRRFIP2Q9Y608 721 aaKnown RBP5.16□□□□□ -1.58
PRKDC-205ENST00000535375 CPED1A4D0V7 1026 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 BUB3O43684 328 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 ZNF432O94892 652 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 KDM4BO94953 1096 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 CLDN14O95500 239 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 PMS2P2O95744 297 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 AFPP02771 609 aaKnown RBP5.15□□□□□ -1.59
PRKDC-205ENST00000535375 TFP02787 698 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 PYGLP06737 847 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 TNFAIP1Q13829 316 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 MMEL1Q495T6 779 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 ATP13A5Q4VNC0 1218 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 C9orf50Q5SZB4 431 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 FAM122CQ6P4D5 195 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 KRBA2Q6ZNG9 492 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 Q6ZTC4 211 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 CUZD1Q86UP6 607 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 DHX40Q8IX18 779 aaKnown RBP5.15□□□□□ -1.59
PRKDC-205ENST00000535375 NEK9Q8TD19 979 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 RNF125Q96EQ8 232 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 CNGB3Q9NQW8 809 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 MPP6Q9NZW5 540 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 SLC13A4Q9UKG4 626 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 VDAC3Q9Y277 283 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 PCDHAC2Q9Y5I4 1007 aa5.15□□□□□ -1.59
PRKDC-205ENST00000535375 PLEKHD1A6NEE1 506 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 HNRNPCL2B2RXH8 293 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 NDUFS7O75251 213 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 KRT36O76013 467 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 SRCP12931 536 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 AGAP20933 346 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 ARL1P40616 181 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-205ENST00000535375 GABRB2P47870 512 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 POU5F1BQ06416 359 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 NEXNQ0ZGT2 675 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 RNPS1Q15287 305 aaKnown RBP5.14□□□□□ -1.59
PRKDC-205ENST00000535375 OASLQ15646 514 aaKnown RBP5.14□□□□□ -1.59
PRKDC-205ENST00000535375 EFNB3Q15768 340 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 BAK1Q16611 211 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 FAM69AQ5T7M9 428 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 WDR73Q6P4I2 378 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 LCTLQ6UWM7 567 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 UNQ6126/PRO20091Q6UXV3 157 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 LINGO2Q7L985 606 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 POC1AQ8NBT0 407 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 HTRA1Q92743 480 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 KLHL29Q96CT2 875 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 SLITRK1Q96PX8 696 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 EPYCQ99645 322 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 C17orf75Q9HAS0 396 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 GPR108Q9NPR9 543 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 ZNF224Q9NZL3 707 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 KCND2Q9NZV8 630 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 SIX4Q9UIU6 781 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 KCNG2Q9UJ96 466 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 FBXO9Q9UK97 447 aaPredicted RBP5.14□□□□□ -1.59
PRKDC-205ENST00000535375 A4GNTQ9UNA3 340 aa5.14□□□□□ -1.59
PRKDC-205ENST00000535375 TMEM202A6NGA9 273 aa5.13□□□□□ -1.59
PRKDC-205ENST00000535375 SOCS6O14544 535 aa5.13□□□□□ -1.59
PRKDC-205ENST00000535375 F7P08709 466 aaPredicted RBP5.13□□□□□ -1.59
PRKDC-205ENST00000535375 CTCFP49711 727 aaPredicted RBP5.13□□□□□ -1.59
PRKDC-205ENST00000535375 GNAQP50148 359 aa5.13□□□□□ -1.59
PRKDC-205ENST00000535375 EFNA5P52803 228 aa5.13□□□□□ -1.59
PRKDC-205ENST00000535375 CTF1Q16619 201 aa5.13□□□□□ -1.59
PRKDC-205ENST00000535375 SLC9B1Q4ZJI4 515 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms