RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PCSK9Q8NBP7 692 aaKnown RBP9.1□□□□□ -0.95
SF3B2-216ENST00000534765 C2orf49Q9BVC5 232 aaPredicted RBP9.1□□□□□ -0.95
SF3B2-216ENST00000534765 TMEM109Q9BVC6 243 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 ADNPQ9H2P0 1102 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 ITM2CQ9NQX7 267 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 CHST12Q9NRB3 414 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 DNALI1O14645 258 aaPredicted RBP9.1□□□□□ -0.95
SF3B2-216ENST00000534765 TSC22D2O75157 780 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 DAB2P98082 770 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 IFRD2Q12894 506 aaPredicted RBP9.1□□□□□ -0.95
SF3B2-216ENST00000534765 NANOGP8Q6NSW7 305 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 LRRC8DQ7L1W4 858 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 CHST15Q7LFX5 561 aaPredicted RBP9.1□□□□□ -0.95
SF3B2-216ENST00000534765 RCOR2Q8IZ40 523 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 KCTD6Q8NC69 237 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 BPIFB6Q8NFQ5 453 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 LILRB4Q8NHJ6 448 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 E2F7Q96AV8 911 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 CGREF1Q99674 301 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 CNPY3Q9BT09 278 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 C20orf96Q9NUD7 363 aaPredicted RBP9.1□□□□□ -0.95
SF3B2-216ENST00000534765 DNAJC28Q9NX36 388 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 SENP1Q9P0U3 644 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 AURKCQ9UQB9 309 aa9.1□□□□□ -0.95
SF3B2-216ENST00000534765 PLXNA3P51805 1871 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 A0A1W2PQ72 361 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 MSI1O43347 362 aaKnown RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 AKAP10O43572 662 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 RPL17P18621 184 aaKnown RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 RPL22P35268 128 aaKnown RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 BCAT1P54687 386 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 MRPS5P82675 430 aaKnown RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 ARHGEF6Q15052 776 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 EML3Q32P44 896 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 TRIM60Q495X7 471 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 RTP2Q5QGT7 225 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 LRRC38Q5VT99 294 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 C3orf62Q6ZUJ4 267 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 SLC26A9Q7LBE3 791 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 TCAIMQ8N3R3 496 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 PSD4Q8NDX1 1056 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 PSMA8Q8TAA3 256 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 DEPDC1BQ8WUY9 529 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 P2RY11Q96G91 374 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 VPS35Q96QK1 796 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 SERPINI1Q99574 410 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 HGH1Q9BTY7 390 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 FRMD8Q9BZ67 464 aaPredicted RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 SEPT3Q9UH03 358 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 KIAA1257Q9ULG3 409 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 FIS1Q9Y3D6 152 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 VPS13AQ96RL7 3174 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 TNFRSF10BO14763 440 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 CCNT2O60583 730 aaKnown RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 BMP1P13497 986 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 CCL5P13501 91 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 BMXP51813 675 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 PPP1R3AQ16821 1122 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 DDR2Q16832 855 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 AARS2Q5JTZ9 985 aaKnown RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 NCBP2-AS2Q69YL0 99 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 SULT1C3Q6IMI6 304 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 CATSPER1Q8NEC5 780 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 CPT1BQ92523 772 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 JADE3Q92613 823 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 ISOC1Q96CN7 298 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 GPAMQ9HCL2 828 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 POMPQ9Y244 141 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 FARP1Q9Y4F1 1045 aaPredicted RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 GOLGA4Q13439 2230 aaKnown RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 TTC34A8MYJ7 566 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 DPYSL4O14531 572 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 DCXO43602 365 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 ACSL4O60488 711 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 TRIM16O95361 564 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 TBX18O95935 607 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 RNASEH2BQ5TBB1 312 aaKnown RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 SCD5Q86SK9 330 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 ADCK1Q86TW2 530 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 BHLHE22Q8NFJ8 381 aaPredicted RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.09□□□□□ -0.95
SF3B2-216ENST00000534765 ZNF560Q96MR9 790 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 NPY6RQ99463 290 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 LGMNQ99538 433 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 BOLA1Q9Y3E2 137 aa9.09□□□□□ -0.95
SF3B2-216ENST00000534765 MAP1BP46821 2468 aaKnown RBP9.09□□□□□ -0.96
SF3B2-216ENST00000534765 CROCCQ5TZA2 2017 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 GOLGA8OA6NCC3 632 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 MOXD2PA6NHM9 499 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 GOLGA8NF8WBI6 632 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 AURKAO14965 403 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 MDM4O15151 490 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 CCNKO75909 580 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 RBL1P28749 1068 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 YAP1P46937 504 aaKnown RBP9.08□□□□□ -0.96
SF3B2-216ENST00000534765 DRG2P55039 364 aaKnown RBP9.08□□□□□ -0.96
SF3B2-216ENST00000534765 DAOAP59103 153 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 GPX6P59796 221 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 STX1BP61266 288 aa9.08□□□□□ -0.96
SF3B2-216ENST00000534765 EIF4EBP2Q13542 120 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms