RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 TSPAN16Q9UKR8 245 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ZFR2Q9UPR6 939 aaKnown RBP5.38□□□□□ -1.55
ATM-224ENST00000534625 STON1Q9Y6Q2 735 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 ATXN2Q99700 1313 aaKnown RBP5.38□□□□□ -1.55
ATM-224ENST00000534625 FASNP49327 2511 aaKnown RBP5.38□□□□□ -1.55
ATM-224ENST00000534625 PCDH15Q96QU1 1955 aa5.38□□□□□ -1.55
ATM-224ENST00000534625 YJEFN3A6XGL0 299 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 KCNJ18B7U540 433 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 E7ENQ6 273 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 O00370 1275 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 NPC1O15118 1278 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 MUSKO15146 869 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 PMM2O15305 246 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 RASGRP1O95267 797 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 SMC2O95347 1197 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 CFIP05156 583 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 VDRP11473 427 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 CD59P13987 128 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 HOXD9P28356 352 aaPredicted RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 DPP6P42658 865 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 IL12RB1P42701 662 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 ETV4P43268 484 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 RRADP55042 308 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 SLC8A3P57103 927 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 LRRC63Q05C16 580 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 GFPT1Q06210 699 aaPredicted RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 ADIGQ0VDE8 80 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 BST2Q10589 180 aaKnown RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 LRMPQ12912 555 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 DUSP8Q13202 625 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 SEMA3BQ13214 749 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 ZNF234Q14588 700 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 FUT11Q495W5 492 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 DCAF17Q5H9S7 520 aaPredicted RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 BSPRYQ5W0U4 402 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 LRSAM1Q6UWE0 723 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 LCLAT1Q6UWP7 414 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 KIAA1324Q6UXG2 1013 aaKnown RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 LARP4Q71RC2 724 aaKnown RBP eCLIP5.37□□□□□ -1.55
ATM-224ENST00000534625 RSRC2Q7L4I2 434 aaKnown RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 FMNL3Q8IVF7 1028 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 ZC3H7AQ8IWR0 971 aaKnown RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 SCML4Q8N228 414 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 OR2I1PQ8NGU4 316 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 LMO3Q8TAP4 145 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 CEP76Q8TAP6 659 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 SLC35F5Q8WV83 523 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 SORCS1Q8WY21 1168 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 SMARCE1Q969G3 411 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 TIGD1Q96MW7 591 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 TSG101Q99816 390 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 SLC2A11Q9BYW1 496 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 LRRC4Q9HBW1 653 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 ITM2CQ9NQX7 267 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 OLA1Q9NTK5 396 aaKnown RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 ELOVL2Q9NXB9 296 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 WSB2Q9NYS7 404 aaPredicted RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 USP36Q9P275 1121 aaKnown RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 ARMCX3Q9UH62 379 aaPredicted RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 SFMBT1Q9UHJ3 866 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 STOML2Q9UJZ1 356 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 KIAA1257Q9ULG3 409 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 HBS1LQ9Y450 684 aaKnown RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 TCAF1Q9Y4C2 921 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 URB1O60287 2271 aaKnown RBP5.37□□□□□ -1.55
ATM-224ENST00000534625 FREM2Q5SZK8 3169 aa5.37□□□□□ -1.55
ATM-224ENST00000534625 ZFHX4Q86UP3 3567 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 SPAARA0A1B0GVQ0 90 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 GOLGA6L4A6NEF3 574 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 PRAMEF25A6NGN4 478 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 PSMA7O14818 248 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 GSTA4O15217 222 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 MSI1O43347 362 aaKnown RBP5.36□□□□□ -1.55
ATM-224ENST00000534625 TIMM44O43615 452 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 TSPAN3O60637 253 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 OPHN1O60890 802 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 FZD7O75084 574 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 NDUFS2O75306 463 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 GJB3O75712 270 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 LATS1O95835 1130 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 CALCAP01258 141 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 IGLV3-19P01714 112 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 IGLV3-27P01718 113 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 PROS1P07225 676 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 PAEPP09466 180 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 SETSIPP0DME0 302 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 CD19P15391 556 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 TBXAS1P24557 533 aaPredicted RBP5.36□□□□□ -1.55
ATM-224ENST00000534625 PRKCHP24723 683 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 CD6P30203 668 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 HLA-FP30511 346 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 ADCY8P40145 1251 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 FMO5P49326 533 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 HARS2P49590 506 aaKnown RBP5.36□□□□□ -1.55
ATM-224ENST00000534625 RGS7P49802 495 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 TPMTP51580 245 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 SGSHP51688 502 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 ZNF132P52740 706 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 COPAP53621 1224 aa5.36□□□□□ -1.55
ATM-224ENST00000534625 DAOAP59103 153 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms