RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ETV3P41162 512 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 CSNK1DP48730 415 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 TPM4P67936 248 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 ZBTB17Q13105 803 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 ZNF211Q13398 564 aaPredicted RBP9.68□□□□□ -0.86
SSBP3-215ENST00000533946 KRT81Q14533 505 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 PRRT3Q5FWE3 981 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 TMCO4Q5TGY1 634 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 PROSER1Q86XN7 944 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 HID1Q8IV36 788 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 PSTKQ8IV42 348 aaKnown RBP9.68□□□□□ -0.86
SSBP3-215ENST00000533946 SLC35F3Q8IY50 421 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 PHACTR4Q8IZ21 702 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 CBARPQ8N350 705 aaPredicted RBP9.68□□□□□ -0.86
SSBP3-215ENST00000533946 CNTD1Q8N815 330 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 ARRDC2Q8TBH0 407 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 PIH1D2Q8WWB5 315 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 CASKIN2Q8WXE0 1202 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 RAB7BQ96AH8 199 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 TRIM11Q96F44 468 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 LGMNQ99538 433 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 MGME1Q9BQP7 344 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 APOOQ9BUR5 198 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 C10orf88Q9H8K7 445 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 FGF22Q9HCT0 170 aa9.68□□□□□ -0.86
SSBP3-215ENST00000533946 CPED1A4D0V7 1026 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 F5H423 210 aaPredicted RBP9.67□□□□□ -0.86
SSBP3-215ENST00000533946 KCNK1O00180 336 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 AQP9O43315 295 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 AKR1B10O60218 316 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 LZTS3O60299 673 aaPredicted RBP9.67□□□□□ -0.86
SSBP3-215ENST00000533946 H2AFZP0C0S5 128 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 TMEM253P0C7T8 217 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 KRT10P13645 584 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 KDELR1P24390 212 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 ACP1P24666 158 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 ITPKBP27987 946 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 HTR7P34969 479 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 NUDT1P36639 197 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 ARL4AP40617 200 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 MMP13P45452 471 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 RABIFP47224 123 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 BCL2L1Q07817 233 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 NSUN2Q08J23 767 aaKnown RBP eCLIP9.67□□□□□ -0.86
SSBP3-215ENST00000533946 GALNT2Q10471 571 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 OVGP1Q12889 678 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 LRRC14Q15048 493 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 PAFAH1B3Q15102 231 aaKnown RBP9.67□□□□□ -0.86
SSBP3-215ENST00000533946 ENPP7Q6UWV6 458 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 Q6ZVL8 140 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 H2AFVQ71UI9 128 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 DPPA4Q7L190 304 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 TRIM74Q86UV6 250 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 PARGQ86W56 976 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 TEX26Q8N6G2 289 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 PLD5Q8N7P1 536 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 KCTD6Q8NC69 237 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 HNRNPLLQ8WVV9 542 aaKnown RBP9.67□□□□□ -0.86
SSBP3-215ENST00000533946 ASB12Q8WXK4 309 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 SKA1Q96BD8 255 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 RNF25Q96BH1 459 aaPredicted RBP9.67□□□□□ -0.86
SSBP3-215ENST00000533946 FAF2Q96CS3 445 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 EID2BQ96D98 161 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 COQ10AQ96MF6 247 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 ZNF641Q96N77 438 aaPredicted RBP9.67□□□□□ -0.86
SSBP3-215ENST00000533946 NUDCD1Q96RS6 583 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 SEMA3CQ99985 751 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 ATP13A3Q9H7F0 1226 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 DTLQ9NZJ0 730 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 SIRPGQ9P1W8 387 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 SEPT3Q9UH03 358 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 CHKBQ9Y259 395 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 REXO2Q9Y3B8 237 aaKnown RBP9.67□□□□□ -0.86
SSBP3-215ENST00000533946 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.67□□□□□ -0.86
SSBP3-215ENST00000533946 RAI2Q9Y5P3 530 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 DUSP10Q9Y6W6 482 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 FAM208BQ5VWN6 2430 aa9.67□□□□□ -0.86
SSBP3-215ENST00000533946 OPA1O60313 960 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 FZD6O60353 706 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 SOD1P00441 154 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 C1SP09871 688 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 CKMT1AP12532 417 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 JUPP14923 745 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 PECAM1P16284 738 aaPredicted RBP9.66□□□□□ -0.86
SSBP3-215ENST00000533946 XPAP23025 273 aaPredicted RBP9.66□□□□□ -0.86
SSBP3-215ENST00000533946 SERPINA4P29622 427 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 HNF1BP35680 557 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 GARSP41250 739 aaKnown RBP9.66□□□□□ -0.86
SSBP3-215ENST00000533946 PDX1P52945 283 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 DYNLT1P63172 113 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 RAD51Q06609 339 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 ZNF235Q14590 738 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 ACAP1Q15027 740 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 ACOX1Q15067 660 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 NOMO1Q15155 1222 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 SKOR2Q2VWA4 1001 aaPredicted RBP9.66□□□□□ -0.86
SSBP3-215ENST00000533946 FAXCQ5TGI0 409 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 CDCP2Q5VXM1 449 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 PPP1R2P3Q6NXS1 205 aa9.66□□□□□ -0.86
SSBP3-215ENST00000533946 AADACL2Q6P093 401 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms