RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 CEP63Q96MT8 703 aa7.85□□□□□ -1.15
NXF1-215ENST00000533440 TEFMQ96QE5 360 aaKnown RBP7.85□□□□□ -1.15
NXF1-215ENST00000533440 TBCBQ99426 244 aa7.85□□□□□ -1.15
NXF1-215ENST00000533440 EFHD1Q9BUP0 239 aa7.85□□□□□ -1.15
NXF1-215ENST00000533440 GTPBP4Q9BZE4 634 aaKnown RBP7.85□□□□□ -1.15
NXF1-215ENST00000533440 TTYH3Q9C0H2 523 aa7.85□□□□□ -1.15
NXF1-215ENST00000533440 TMEM168Q9H0V1 697 aa7.85□□□□□ -1.15
NXF1-215ENST00000533440 RETREG1Q9H6L5 497 aa7.85□□□□□ -1.15
NXF1-215ENST00000533440 GPN2Q9H9Y4 310 aaPredicted RBP7.85□□□□□ -1.15
NXF1-215ENST00000533440 UBE2TQ9NPD8 197 aaPredicted RBP7.85□□□□□ -1.15
NXF1-215ENST00000533440 MRPL40Q9NQ50 206 aaKnown RBP7.85□□□□□ -1.15
NXF1-215ENST00000533440 CUEDC1Q9NWM3 386 aaPredicted RBP7.85□□□□□ -1.15
NXF1-215ENST00000533440 SLC39A1Q9NY26 324 aa7.85□□□□□ -1.15
NXF1-215ENST00000533440 STAP1Q9ULZ2 295 aa7.85□□□□□ -1.15
NXF1-215ENST00000533440 TSPAN11A1L157 253 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 RHPN2P1A8MT19 583 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 K7EM74 188 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 CACNB4O00305 520 aaPredicted RBP7.84□□□□□ -1.15
NXF1-215ENST00000533440 ZW10O43264 779 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 VPS4BO75351 444 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 PRKCGP05129 697 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 PCCBP05166 539 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 FGF1P05230 155 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 CCNB1P14635 433 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 NR1D1P20393 614 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 BMP6P22004 513 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 GNLYP22749 145 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 ALDH4A1P30038 563 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 CSTF2P33240 577 aaKnown RBP eCLIP7.84□□□□□ -1.15
NXF1-215ENST00000533440 TRIM23P36406 574 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 MAPKAPK2P49137 400 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 SNX16P57768 344 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 RAB15P59190 212 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 MC1RQ01726 317 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 NRG1Q02297 640 aaPredicted RBP7.84□□□□□ -1.15
NXF1-215ENST00000533440 RAD51Q06609 339 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 ABHD18Q0P651 414 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 PNOCQ13519 176 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 PKP1Q13835 747 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 CCDC40Q4G0X9 1142 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 DCAF12Q5T6F0 453 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 MANEALQ5VSG8 457 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 ENOSF1Q7L5Y1 443 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 TIPARPQ7Z3E1 657 aaKnown RBP7.84□□□□□ -1.15
NXF1-215ENST00000533440 NLRP14Q86W24 1093 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 NRROSQ86YC3 692 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 TICAM1Q8IUC6 712 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 PASD1Q8IV76 773 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 NLGN4XQ8N0W4 816 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 NLGN4YQ8NFZ3 816 aaPredicted RBP7.84□□□□□ -1.15
NXF1-215ENST00000533440 KIAA1143Q96AT1 154 aaPredicted RBP7.84□□□□□ -1.15
NXF1-215ENST00000533440 RTP4Q96DX8 246 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 HMCESQ96FZ2 354 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 SPATA32Q96LK8 384 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 GDAP1L1Q96MZ0 367 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 DPYSL5Q9BPU6 564 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 INTS2Q9H0H0 1204 aaKnown RBP7.84□□□□□ -1.15
NXF1-215ENST00000533440 MAGEH1Q9H213 219 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 GOLPH3LQ9H4A5 285 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 PRDM8Q9NQV8 689 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 SPATS2LQ9NUQ6 558 aaKnown RBP7.84□□□□□ -1.15
NXF1-215ENST00000533440 RMND1Q9NWS8 449 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 OCIAD1Q9NX40 245 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 PDP2Q9P2J9 529 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 VPS4AQ9UN37 437 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 KCTD3Q9Y597 815 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 KCNMB2Q9Y691 235 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 MED13Q9UHV7 2174 aa7.84□□□□□ -1.15
NXF1-215ENST00000533440 IGHV1OR21-1A0A087WYE8 117 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 CFAP69A5D8W1 941 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 ZSCAN5CA6NGD5 496 aaPredicted RBP7.83□□□□□ -1.16
NXF1-215ENST00000533440 EFCAB7A8K855 629 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 INSIG1O15503 277 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 KDELR3O43731 214 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 SEMA7AO75326 666 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 TMCC1O94876 653 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 IGSF6O95976 241 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 RHOQP17081 205 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 TCN2P20062 427 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 POU3F2P20265 443 aaPredicted RBP7.83□□□□□ -1.16
NXF1-215ENST00000533440 KELP23276 732 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 CSF2RBP32927 897 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 SCNN1AP37088 669 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 MMP12P39900 470 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 STAT1P42224 750 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 LIG3P49916 1009 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 RNASE9P60153 205 aaKnown RBP7.83□□□□□ -1.16
NXF1-215ENST00000533440 UGP2Q16851 508 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 TSR1Q2NL82 804 aaKnown RBP7.83□□□□□ -1.16
NXF1-215ENST00000533440 INO80DQ53TQ3 878 aaPredicted RBP7.83□□□□□ -1.16
NXF1-215ENST00000533440 ATP1A1-AS1Q5TC04 95 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 ANKS6Q68DC2 871 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 ZNF787Q6DD87 383 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 SMYD5Q6GMV2 418 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 TMEM71Q6P5X7 295 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 LEKR1Q6ZMV7 388 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 HEATR4Q86WZ0 1026 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 TRIM59Q8IWR1 403 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 CCDC13Q8IYE1 715 aa7.83□□□□□ -1.16
NXF1-215ENST00000533440 UNC5BQ8IZJ1 945 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms