RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 IFI44Q8TCB0 444 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 TRIM44Q96DX7 344 aaPredicted RBP11.39□□□□□ -0.59
CLCF1-202ENST00000533438 CCDC42Q96M95 316 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 NSMCE3Q96MG7 304 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 ZNF830Q96NB3 372 aaPredicted RBP11.39□□□□□ -0.59
CLCF1-202ENST00000533438 IL12RB2Q99665 862 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 CINPQ9BW66 212 aaPredicted RBP11.39□□□□□ -0.59
CLCF1-202ENST00000533438 CLPBQ9H078 707 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 ATP13A3Q9H7F0 1226 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 ZWILCHQ9H900 591 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 SP110Q9HB58 689 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 EVA1BQ9NVM1 165 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 NCKIPSDQ9NZQ3 722 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 MYO1AQ9UBC5 1043 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 ATP8A1Q9Y2Q0 1164 aa11.39□□□□□ -0.59
CLCF1-202ENST00000533438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.39□□□□□ -0.59
CLCF1-202ENST00000533438 CFAP69A5D8W1 941 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 TMEM110-MUSTN1A8MSY1 372 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 LMO7DNF2Z398 122 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 DFFAO00273 331 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 TRAFD1O14545 582 aaPredicted RBP11.38□□□□□ -0.59
CLCF1-202ENST00000533438 ATXN7O15265 892 aaPredicted RBP11.38□□□□□ -0.59
CLCF1-202ENST00000533438 BRINP1O60477 761 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 C1QL1O75973 258 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 LCA5LO95447 670 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 TGM2P21980 687 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 SERPINA4P29622 427 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 CYLC1P35663 651 aaPredicted RBP11.38□□□□□ -0.59
CLCF1-202ENST00000533438 ABCG1P45844 678 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 LIG3P49916 1009 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 PPARDQ03181 441 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 RALGDSQ12967 914 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 C1orf61Q13536 156 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 SLC18A3Q16572 532 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 CDKN3Q16667 212 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 C6orf132Q5T0Z8 1188 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 ERAP2Q6P179 960 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 POLNQ7Z5Q5 900 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 SPOCK2Q92563 424 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 CRELD1Q96HD1 420 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 ZNF599Q96NL3 588 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 DCBLD2Q96PD2 775 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 DEPDC7Q96QD5 511 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 PSKH2Q96QS6 385 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 APOOQ9BUR5 198 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 SLC13A1Q9BZW2 595 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 DEF6Q9H4E7 631 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 ETNK2Q9NVF9 386 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 NENFQ9UMX5 172 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 EPN1Q9Y6I3 576 aaPredicted RBP11.38□□□□□ -0.59
CLCF1-202ENST00000533438 ATMQ13315 3056 aa11.38□□□□□ -0.59
CLCF1-202ENST00000533438 A0A087X0T9 212 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 AKR1B10O60218 316 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 NDUFA10O95299 355 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 PEX11BO96011 259 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 PRKCGP05129 697 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 CELA2BP08218 269 aaPredicted RBP11.37□□□□□ -0.59
CLCF1-202ENST00000533438 FAM228BP0C875 321 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 RARAP10276 462 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 TSHRP16473 764 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 GM2AP17900 193 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 ITPKBP27987 946 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 SCNN1BP51168 640 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 BLKP51451 505 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 RENBPP51606 427 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 HK3P52790 923 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 SLC25A11Q02978 314 aaKnown RBP11.37□□□□□ -0.59
CLCF1-202ENST00000533438 BCL2L1Q07817 233 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 SLC10A7Q0GE19 358 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 MTM1Q13496 603 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 PIGHQ14442 188 aaPredicted RBP11.37□□□□□ -0.59
CLCF1-202ENST00000533438 INPP5AQ14642 412 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 LBRQ14739 615 aaKnown RBP11.37□□□□□ -0.59
CLCF1-202ENST00000533438 NFATC4Q14934 902 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 NR0B2Q15466 257 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 ALG11Q2TAA5 492 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 SMTNL2Q2TAL5 461 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 TBC1D25Q3MII6 688 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 BOLA3Q53S33 107 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 PERM1Q5SV97 790 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 CFAP58Q5T655 872 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 FAXCQ5TGI0 409 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 TMCO4Q5TGY1 634 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 TXNRD3NBQ6F5E7 133 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 LIPIQ6XZB0 460 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 NYAP1Q6ZVC0 841 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 EFL1Q7Z2Z2 1120 aaKnown RBP11.37□□□□□ -0.59
CLCF1-202ENST00000533438 SLC35F3Q8IY50 421 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 NIPA2Q8N8Q9 360 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 MAPK15Q8TD08 544 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 FGF11Q92914 225 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 CSPG4P5Q96PW8 444 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 THAP2Q9H0W7 228 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 SEPT3Q9UH03 358 aa11.37□□□□□ -0.59
CLCF1-202ENST00000533438 MGAQ8IWI9 3026 aa11.36□□□□□ -0.59
CLCF1-202ENST00000533438 CPED1A4D0V7 1026 aa11.36□□□□□ -0.59
CLCF1-202ENST00000533438 EIF4E1BA6NMX2 242 aaKnown RBP11.36□□□□□ -0.59
CLCF1-202ENST00000533438 H3BRJ5 948 aa11.36□□□□□ -0.59
CLCF1-202ENST00000533438 YY2O15391 372 aa11.36□□□□□ -0.59
CLCF1-202ENST00000533438 HTRA2O43464 458 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms