RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 DDX3YO15523 660 aaKnown RBP20.55■□□□□ 0.88
CCS-208ENST00000533244 KRT86O43790 486 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 FTCDO95954 541 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 APOC2P02655 101 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 MMP2P08253 660 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 CEACAM1P13688 526 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 IGFALSP35858 605 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 PFN3P60673 137 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 FAM193AP78312 1265 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 SEMG2Q02383 582 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 ARMC12Q5T9G4 340 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 LIPIQ6XZB0 460 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 NAXDQ8IW45 347 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 DEFB124Q8NES8 71 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 PDCD6IPQ8WUM4 868 aaKnown RBP20.55■□□□□ 0.88
CCS-208ENST00000533244 TFB1MQ8WVM0 346 aaKnown RBP20.55■□□□□ 0.88
CCS-208ENST00000533244 PIH1D2Q8WWB5 315 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 HES6Q96HZ4 224 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 C1QTNF7Q9BXJ2 289 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 HEMGNQ9BXL5 484 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 B4GALT6Q9UBX8 382 aa20.55■□□□□ 0.88
CCS-208ENST00000533244 YKT6O15498 198 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 SH3BP5O60239 455 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 CBFA2T3O75081 653 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 NEBLO76041 1014 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 PDHA1P08559 390 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 PYGMP11217 842 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 GM2AP17900 193 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 NOVA1P51513 510 aaKnown RBP20.54■□□□□ 0.88
CCS-208ENST00000533244 PRAMEF14Q5SWL7 426 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 PSAPL1Q6NUJ1 521 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 Q6ZSR6 202 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 B4GALNT4Q76KP1 1039 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 DCP2Q8IU60 420 aaKnown RBP20.54■□□□□ 0.88
CCS-208ENST00000533244 PAF1Q8N7H5 531 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 SCRN2Q96FV2 425 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 MBNL1Q9NR56 388 aaKnown RBP20.54■□□□□ 0.88
CCS-208ENST00000533244 PACSIN2Q9UNF0 486 aaPredicted RBP20.54■□□□□ 0.88
CCS-208ENST00000533244 COQ6Q9Y2Z9 468 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 TTLL3Q9Y4R7 772 aa20.54■□□□□ 0.88
CCS-208ENST00000533244 GIPC1O14908 333 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 FLRT2O43155 660 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 PRLP01236 227 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 CCDC175P0C221 793 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 PTPN3P26045 913 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 EPHA8P29322 1005 aaPredicted RBP20.53■□□□□ 0.88
CCS-208ENST00000533244 RABIFP47224 123 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 ARRB1P49407 418 aaPredicted RBP20.53■□□□□ 0.88
CCS-208ENST00000533244 SKOR1P84550 965 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 NOMO1Q15155 1222 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 WSCD2Q2TBF2 565 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 TEX44Q53QW1 395 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 AADACL2Q6P093 401 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 PTAR1Q7Z6K3 402 aaPredicted RBP20.53■□□□□ 0.88
CCS-208ENST00000533244 CBARPQ8N350 705 aaPredicted RBP20.53■□□□□ 0.88
CCS-208ENST00000533244 BAHD1Q8TBE0 780 aaPredicted RBP20.53■□□□□ 0.88
CCS-208ENST00000533244 SAP25Q8TEE9 199 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 UBE2Q2Q8WVN8 375 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 TADA1Q96BN2 335 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 IMP4Q96G21 291 aaKnown RBP20.53■□□□□ 0.88
CCS-208ENST00000533244 QKIQ96PU8 341 aaKnown RBP eCLIP20.53■□□□□ 0.88
CCS-208ENST00000533244 CEP41Q9BYV8 373 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 SLC32A1Q9H598 525 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 PCOLCE2Q9UKZ9 415 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 GUCA1BQ9UMX6 200 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 NCOR2Q9Y618 2525 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 HACD1B0YJ81 288 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 TOR1BO14657 336 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 MTSS1O43312 755 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 ELFN1P0C7U0 828 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 LHCGRP22888 699 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 NFKBIAP25963 317 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 VIPR1P32241 457 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 WASHC5Q12768 1159 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 XRCC4Q13426 336 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 SUZ12Q15022 739 aaKnown RBP20.53■□□□□ 0.88
CCS-208ENST00000533244 SLC14A2Q15849 920 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 CNGA3Q16281 694 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 FAM182AQ5T1J6 154 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 KDM7AQ6ZMT4 941 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 KANSL1Q7Z3B3 1105 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.53■□□□□ 0.88
CCS-208ENST00000533244 UBL4BQ8N7F7 174 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 HAUS1Q96CS2 278 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 IFT43Q96FT9 208 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 TEKT5Q96M29 485 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 CAMK1GQ96NX5 476 aa20.53■□□□□ 0.88
CCS-208ENST00000533244 SPTY2D1-AS1A0A0U1RR47 76 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 NPIPB15A6NHN6 443 aaPredicted RBP20.52■□□□□ 0.87
CCS-208ENST00000533244 HEXIM1O94992 359 aaKnown RBP20.52■□□□□ 0.87
CCS-208ENST00000533244 CA4P22748 312 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 CETN2P41208 172 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 CD86P42081 329 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 RPL26P61254 145 aaKnown RBP20.52■□□□□ 0.87
CCS-208ENST00000533244 YPEL5P62699 121 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 IL9RQ01113 521 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 LRRC14Q15048 493 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 IRF4Q15306 451 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 TPRG1LQ5T0D9 272 aa20.52■□□□□ 0.87
CCS-208ENST00000533244 USP45Q70EL2 814 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms