RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 TSEN2Q8NCE0 465 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 DENND6BQ8NEG7 585 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 RHBDD1Q8TEB9 315 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 SETD7Q8WTS6 366 aaKnown RBP13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 MAIP1Q8WWC4 291 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 IFT43Q96FT9 208 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 C16orf45Q96MC5 204 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 OLFM3Q96PB7 478 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 OSBPL9Q96SU4 736 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 SUV39H2Q9H5I1 410 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 GPR27Q9NS67 375 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 RBM22Q9NW64 420 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 SNX12Q9UMY4 172 aa13.05□□□□□ -0.32
TRAPPC4-212ENST00000533058 TCRBV7S2A1N4TA0A589 114 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 SPINT1O43278 529 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 MTSS1O43312 755 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 TNFSF14O43557 240 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 STK10O94804 968 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 PEX11BO96011 259 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 PAK4O96013 591 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 JCHAINP01591 159 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 THEGLP0DJG4 465 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 RBP3P10745 1247 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 TIMP2P16035 220 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 PRLRP16471 622 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 TCP1P17987 556 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 EPHA8P29322 1005 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 HSPA9P38646 679 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 SCNN1BP51168 640 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 ELP6Q0PNE2 266 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 SGCGQ13326 291 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 XRCC4Q13426 336 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 FGL2Q14314 439 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 TMEM52BQ4KMG9 183 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 SYT10Q6XYQ8 523 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 GCNT7Q6ZNI0 430 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 SRLQ86TD4 932 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 ADAMTS14Q8WXS8 1223 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 QKIQ96PU8 341 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 KLF6Q99612 283 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 CEP41Q9BYV8 373 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 C10orf88Q9H8K7 445 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 SCUBE2Q9NQ36 999 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 APOBEC2Q9Y235 224 aaKnown RBP13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 PLXNA2O75051 1894 aa13.04□□□□□ -0.32
TRAPPC4-212ENST00000533058 ACACBO00763 2458 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 CFAP69A5D8W1 941 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 IGLON5A6NGN9 336 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 A6NNZ2 444 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 NEMP1O14524 444 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 TOR1BO14657 336 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 INSIG1O15503 277 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 FTH1P19P0C7X4 201 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 MAXP61244 160 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 AP1S1P61966 158 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 FOXC1Q12948 553 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 KLF1Q13351 362 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 SNX1Q13596 522 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 AGERQ15109 404 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 PRKD1Q15139 912 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 UGP2Q16851 508 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 RALGPS1Q5JS13 557 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 PRAMEF14Q5SWL7 426 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 CFAP58Q5T655 872 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 KYAT3Q6YP21 454 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 KANSL1Q7Z3B3 1105 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 RAB44Q7Z6P3 723 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 C1orf54Q8WWF1 131 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 ATG4AQ8WYN0 398 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 MAML1Q92585 1016 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 KLK6Q92876 244 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 FATE1Q969F0 183 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 ECHDC3Q96DC8 303 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 MS4A14Q96JA4 679 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 BMFQ96LC9 184 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 AGAP3Q96P47 875 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 NAP1L3Q99457 506 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 ATP13A3Q9H7F0 1226 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 KLHL8Q9P2G9 620 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 CA5BQ9Y2D0 317 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 BTBD3Q9Y2F9 522 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 R3HDM2Q9Y2K5 976 aaKnown RBP13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 NEUROG3Q9Y4Z2 214 aa13.03□□□□□ -0.32
TRAPPC4-212ENST00000533058 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 A0A1W2PQ67 120 aa13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 TTC24A2A3L6 582 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 PGRMC1O00264 195 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 FPGTO14772 594 aa13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 MUSKO15146 869 aa13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 KCNN4O15554 427 aa13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 ITGAVP06756 1048 aa13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 CR2P20023 1033 aa13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 RBL1P28749 1068 aa13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 SERPINA4P29622 427 aa13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 RABIFP47224 123 aa13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 RGRP47804 291 aa13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 ETF1P62495 437 aaKnown RBP13.02□□□□□ -0.33
TRAPPC4-212ENST00000533058 POLR2LP62875 67 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms