RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	HDAC3	O15379	428 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	CXCL14	O95715	111 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	LINC00032	P0C843	101 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	CDC25C	P30307	473 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	PSMD4	P55036	377 aa	Known RBP	19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	MON1A	Q86VX9	555 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	RP9	Q8TA86	221 aa	Known RBP	19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	C3orf18	Q9UK00	162 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	GTPBP1	O00178	669 aa	Known RBP	19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	CACNB4	O00305	520 aa	Predicted RBP	19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	OPLAH	O14841	1288 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	PAPSS1	O43252	624 aa	Predicted RBP	19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	ADH1C	P00326	375 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	AIF1	P55008	147 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	RALGDS	Q12967	914 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	CCNI	Q14094	377 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	ADGRG2	Q8IZP9	1017 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	FNIP1	Q8TF40	1166 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	MCCC1	Q96RQ3	725 aa	Predicted RBP	19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	HMG20A	Q9NP66	347 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	MAT2B	Q9NZL9	334 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	KIAA1522	Q9P206	1035 aa	Predicted RBP	19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	GGA2	Q9UJY4	613 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	PCDHAC2	Q9Y5I4	1007 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	COL5A2	P05997	1499 aa	Predicted RBP	19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	TLL1	O43897	1013 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	GABRR2	P28476	465 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	RCVRN	P35243	200 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	ELF3	P78545	371 aa	Predicted RBP	19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	PRKG2	Q13237	762 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	RNF43	Q68DV7	783 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	OXCT2	Q9BYC2	517 aa	Predicted RBP	19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	NT5C1B-RDH14	C9J2C7	533 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	BIRC5	O15392	142 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	CCNYL3	P0C7X3	344 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	UGT2B15	P54855	530 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	BNIP2	Q12982	314 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	KLHL24	Q6TFL4	600 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	CRTC3	Q6UUV7	619 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	MYDGF	Q969H8	173 aa		19.62	■□□□□ 0.73
FGFR1-238	ENST00000532791	AP3D1	O14617	1153 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	BMP7	P18075	431 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	ITGB5	P18084	799 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	PDK4	Q16654	411 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	C9orf57	Q5W0N0	161 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	DEPDC4	Q8N2C3	294 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	EEF1AKMT1	Q8WVE0	214 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	FNDC11	Q9BVV2	318 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	MST1R	Q04912	1400 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	FARP2	O94887	1054 aa	Predicted RBP	19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	HNRNPL	P14866	589 aa	Known RBP eCLIP	19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	GABRB2	P47870	512 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	NDUFV1	P49821	464 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	HNMT	P50135	292 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	WNT3A	P56704	352 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	TAS2R40	P59535	323 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	LSM12	Q3MHD2	195 aa	Known RBP	19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	TCEAL5	Q5H9L2	206 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	PACS1	Q6VY07	963 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	MYO19	Q96H55	970 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	TTLL2	Q9BWV7	592 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	NXF3	Q9H4D5	531 aa	Known RBP	19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	ACSS3	Q9H6R3	686 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	GLUD1	P00367	558 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	UBAP2L	Q14157	1087 aa	Known RBP	19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	POTEH	Q6S545	545 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	PARG	Q86W56	976 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	TNS4	Q8IZW8	715 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	ITCH	Q96J02	903 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	CMTM6	Q9NX76	183 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	PTGFRN	Q9P2B2	879 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	PACSIN3	Q9UKS6	424 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	RAB23	Q9ULC3	237 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	DERA	Q9Y315	318 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	ZNF780B	Q9Y6R6	833 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	PAGE1	O75459	146 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	MFN2	O95140	757 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	DNTT	P04053	509 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	TPP2	P29144	1249 aa	Predicted RBP	19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	OR1D2	P34982	312 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	TAPT1	Q6NXT6	567 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	RBM23	Q86U06	439 aa	Known RBP	19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	TTPAL	Q9BTX7	342 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	CNTNAP1	P78357	1384 aa		19.61	■□□□□ 0.73
FGFR1-238	ENST00000532791	LRAT	O95237	230 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	EIF2B2	P49770	351 aa	Known RBP	19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	SRP54	P61011	504 aa	Known RBP	19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	SPIB	Q01892	262 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	NDUFA5	Q16718	116 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	ANXA8L1	Q5VT79	327 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	KLHL5	Q96PQ7	755 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	HSD17B14	Q9BPX1	270 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	ABCG8	Q9H221	673 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	WTIP	A6NIX2	430 aa	Predicted RBP	19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	NEDD8-MDP1	E9PL57	170 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	WWP2	O00308	870 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	OR10H3	O60404	316 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	SERPINB7	O75635	380 aa		19.6	■□□□□ 0.73
FGFR1-238	ENST00000532791	DGKZ	Q13574	1117 aa		19.6	■□□□□ 0.73

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms