RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 JCHAINP01591 159 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 PRNPP04156 253 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 ITGAVP06756 1048 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 TBC1D3HP0C7X1 549 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 EPHA8P29322 1005 aaPredicted RBP18.77■□□□□ 0.6
PUF60-218ENST00000531995 RENBPP51606 427 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 CCR5P51681 352 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 MAXP61244 160 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 AP1B1Q10567 949 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 WASHC5Q12768 1159 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 XRCC4Q13426 336 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 SIX1Q15475 284 aaPredicted RBP18.77■□□□□ 0.6
PUF60-218ENST00000531995 SMAD1Q15797 465 aaKnown RBP18.77■□□□□ 0.6
PUF60-218ENST00000531995 TBC1D3GQ6DHY5 549 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 TBC1D3CQ6IPX1 549 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.77■□□□□ 0.6
PUF60-218ENST00000531995 BZW1Q7L1Q6 419 aaKnown RBP18.77■□□□□ 0.6
PUF60-218ENST00000531995 DSG4Q86SJ6 1040 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 TBC1D3Q8IZP1 549 aaPredicted RBP18.77■□□□□ 0.6
PUF60-218ENST00000531995 RYBPQ8N488 228 aaPredicted RBP18.77■□□□□ 0.6
PUF60-218ENST00000531995 GRIN3AQ8TCU5 1115 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 SKA1Q96BD8 255 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 CNDP2Q96KP4 475 aaKnown RBP18.77■□□□□ 0.6
PUF60-218ENST00000531995 WDR24Q96S15 920 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 ZDHHC6Q9H6R6 413 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 NT5MQ9NPB1 228 aa18.77■□□□□ 0.6
PUF60-218ENST00000531995 RBM22Q9NW64 420 aaKnown RBP eCLIP18.77■□□□□ 0.6
PUF60-218ENST00000531995 DFNA5O60443 496 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 HLA-DQB2P05538 268 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 NXPH1P58417 271 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 NIPAL4Q0D2K0 466 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 CNTN1Q12860 1018 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 CAMK2BQ13554 666 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 FAM46CQ5VWP2 391 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 ALG1LQ6GMV1 187 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 EID2Q8N6I1 236 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 ARRDC2Q8TBH0 407 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 SAP25Q8TEE9 199 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 TFB1MQ8WVM0 346 aaKnown RBP18.76■□□□□ 0.59
PUF60-218ENST00000531995 LRIG1Q96JA1 1093 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 QKIQ96PU8 341 aaKnown RBP eCLIP18.76■□□□□ 0.59
PUF60-218ENST00000531995 NUDCD1Q96RS6 583 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 CEP41Q9BYV8 373 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 NOD2Q9HC29 1040 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 CA5BQ9Y2D0 317 aa18.76■□□□□ 0.59
PUF60-218ENST00000531995 HACD1B0YJ81 288 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 C1QTNF3-AMACRE9PGA6 284 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 PIGNO95427 931 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 PTPN3P26045 913 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 RBL1P28749 1068 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 HSPA9P38646 679 aaKnown RBP18.75■□□□□ 0.59
PUF60-218ENST00000531995 SCNN1BP51168 640 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 TAS2R38P59533 333 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 ZNF235Q14590 738 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 SLC45A4Q5BKX6 768 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 PIP5KL1Q5T9C9 394 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 SEL1L2Q5TEA6 688 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 AGBL4Q5VU57 503 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 NAPEPLDQ6IQ20 393 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 GDPD4Q6W3E5 623 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 ZSWIM9Q86XI8 627 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 CAMK1DQ8IU85 385 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 SLC35B2Q8TB61 432 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 NSMCE1Q8WV22 266 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 CRELD1Q96HD1 420 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 KLHL32Q96NJ5 620 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 MYOCQ99972 504 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 USP29Q9HBJ7 922 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 AMACRQ9UHK6 382 aa18.75■□□□□ 0.59
PUF60-218ENST00000531995 TLR4O00206 839 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 KPNA3O00505 521 aaPredicted RBP18.74■□□□□ 0.59
PUF60-218ENST00000531995 TRAFD1O14545 582 aaPredicted RBP18.74■□□□□ 0.59
PUF60-218ENST00000531995 LATO43561 262 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 PLRG1O43660 514 aaKnown RBP18.74■□□□□ 0.59
PUF60-218ENST00000531995 SDC3O75056 442 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 RFPL3O75679 317 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 LDOC1O95751 146 aaPredicted RBP18.74■□□□□ 0.59
PUF60-218ENST00000531995 UGT2B4P06133 528 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 MMP2P08253 660 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 RBP3P10745 1247 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 ARRB1P49407 418 aaPredicted RBP18.74■□□□□ 0.59
PUF60-218ENST00000531995 ACADVLP49748 655 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 EIF3EP60228 445 aaKnown RBP18.74■□□□□ 0.59
PUF60-218ENST00000531995 GNG11P61952 73 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 DSC2Q02487 901 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 TEX44Q53QW1 395 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 ZNF805Q5CZA5 627 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 CCDC181Q5TID7 509 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 PARS2Q7L3T8 475 aaKnown RBP18.74■□□□□ 0.59
PUF60-218ENST00000531995 SPATS2Q86XZ4 545 aaKnown RBP18.74■□□□□ 0.59
PUF60-218ENST00000531995 RASGEF1CQ8N431 466 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 COG1Q8WTW3 980 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 MS4A14Q96JA4 679 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 HDAC8Q9BY41 377 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 SUV39H2Q9H5I1 410 aa18.74■□□□□ 0.59
PUF60-218ENST00000531995 URB1O60287 2271 aaKnown RBP18.74■□□□□ 0.59
PUF60-218ENST00000531995 C16orf96A6NNT2 1141 aa18.73■□□□□ 0.59
PUF60-218ENST00000531995 H7C0C1 242 aa18.73■□□□□ 0.59
PUF60-218ENST00000531995 SPINT1O43278 529 aa18.73■□□□□ 0.59
PUF60-218ENST00000531995 CEP104O60308 925 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms