RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 HUS1BQ8NHY5 278 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 RNF183Q96D59 192 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 ZC3HAV1LQ96H79 300 aaKnown RBP3.08□□□□□ -1.92
CD44-234ENST00000531873 SIN3AQ96ST3 1273 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 TEX12Q9BXU0 123 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 KLHL4Q9C0H6 718 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 ALDH8A1Q9H2A2 487 aaPredicted RBP3.08□□□□□ -1.92
CD44-234ENST00000531873 PLK3Q9H4B4 646 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 AAMDCQ9H7C9 122 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 MAGEE1Q9HCI5 957 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 CCDC177Q9NQR7 707 aaPredicted RBP3.08□□□□□ -1.92
CD44-234ENST00000531873 PAPOLBQ9NRJ5 636 aaKnown RBP3.08□□□□□ -1.92
CD44-234ENST00000531873 DECR2Q9NUI1 292 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 GIMAP4Q9NUV9 329 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 AGO2Q9UKV8 859 aaKnown RBP3.08□□□□□ -1.92
CD44-234ENST00000531873 UTYO14607 1347 aa3.08□□□□□ -1.92
CD44-234ENST00000531873 C17orf102A2RUQ5 167 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 DPPA5A6NC42 116 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 A6NNC1 897 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 F8W810 466 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 HSPB6O14558 160 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 ADAMDEC1O15204 470 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 HS6ST1O60243 411 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 ATP2C2O75185 946 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 SLC25A12O75746 678 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 HSPA4LO95757 839 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 APOA4P06727 396 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 SRPRAP08240 638 aaKnown RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 ZNF182P17025 639 aaPredicted RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 TRIM21P19474 475 aaKnown RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 TBXAS1P24557 533 aaPredicted RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 ACADLP28330 430 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 EPHB2P29323 1055 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 TERF1P54274 439 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 PNLIPRP2P54317 469 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 TMPRSS3P57727 454 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 UBXN2AP68543 259 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 FAM27E3Q08E93 113 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 IKQ13123 557 aaPredicted RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 LAMB3Q13751 1172 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 CAPSQ13938 189 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 PSMD6Q15008 389 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 SOWAHAQ2M3V2 549 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 TCTN1Q2MV58 587 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 SMTNL2Q2TAL5 461 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 SLC9C1Q4G0N8 1177 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 PRAMEF19Q5SWL8 479 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 GSTA5Q7RTV2 222 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 UBE2Q1Q7Z7E8 422 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 HAPLN4Q86UW8 402 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 AACSQ86V21 672 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 DNAAF5Q86Y56 855 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 CCDC13Q8IYE1 715 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 TEX11Q8IYF3 940 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 PARP16Q8N5Y8 322 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 DPP10Q8N608 796 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 ZBTB2Q8N680 514 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 HORMAD2Q8N7B1 307 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 SEMA6DQ8NFY4 1073 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 DUSP19Q8WTR2 217 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 SGCDQ92629 289 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 FBXL8Q96CD0 374 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 SAT2Q96F10 170 aaPredicted RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 PGAP3Q96FM1 320 aaPredicted RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 SLC41A2Q96JW4 573 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 CNDP2Q96KP4 475 aaKnown RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 GCNAQ96QF7 691 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 PAFAH2Q99487 392 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 TMEM47Q9BQJ4 181 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 APOL6Q9BWW8 343 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 B3GNT4Q9C0J1 378 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 NPFFR1Q9GZQ6 430 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 ANKRD2Q9GZV1 360 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 LHPPQ9H008 270 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 SIL1Q9H173 461 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 KLHL31Q9H511 634 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 BPIFA1Q9NP55 256 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.07□□□□□ -1.92
CD44-234ENST00000531873 THSD1Q9NS62 852 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 PAG1Q9NWQ8 432 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 ANKRD10Q9NXR5 420 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 ZNF112Q9UJU3 913 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 ZHX1Q9UKY1 873 aaPredicted RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 NOL7Q9UMY1 257 aaKnown RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 RAP2CQ9Y3L5 183 aa3.07□□□□□ -1.92
CD44-234ENST00000531873 ZNF335Q9H4Z2 1342 aaPredicted RBP3.07□□□□□ -1.92
CD44-234ENST00000531873 LOC102723996A0A087X1L8 192 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 A0A1W2PPC1 479 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 TYW5A2RUC4 315 aaKnown RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 MANSC4A6NHS7 340 aaPredicted RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 A8MXE2 369 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 CHL1O00533 1208 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 TLX3O43711 291 aaPredicted RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 RAMP2O60895 175 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 MITFO75030 526 aaPredicted RBP3.06□□□□□ -1.92
CD44-234ENST00000531873 TBX10O75333 385 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 PROP1O75360 226 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 C22orf31O95567 290 aa3.06□□□□□ -1.92
CD44-234ENST00000531873 FTCDO95954 541 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms