RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 RSPH14Q9UHP6 348 aa14.54□□□□□ -0.08
CPSF1-206ENST00000531480 CHKBQ9Y259 395 aa14.54□□□□□ -0.08
CPSF1-206ENST00000531480 GVINP1Q7Z2Y8 2422 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 TP53BP1Q12888 1972 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-206ENST00000531480 FAM47DPA6NHR8 397 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 MEI4A8MW99 385 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 ANKRD66B4E2M5 251 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 ANXA9O76027 345 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 FSBPO95073 299 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 GM2AP17900 193 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 NFKBIAP25963 317 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 ADRA1AP35348 466 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 MPLP40238 635 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 CDKN3Q16667 212 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 PARP6Q2NL67 630 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 LRRC73Q5JTD7 316 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 SEL1L3Q68CR1 1132 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 LIPIQ6XZB0 460 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 RABEPKQ7Z6M1 372 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 DCLK2Q8N568 766 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 ZNF592Q92610 1267 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 RUBCNQ92622 972 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 KLF6Q99612 283 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-206ENST00000531480 MLPHQ9BV36 600 aaPredicted RBP14.53□□□□□ -0.08
CPSF1-206ENST00000531480 ADGRE3Q9BY15 652 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 SLC17A9Q9BYT1 436 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 B4GALT6Q9UBX8 382 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 SUSD2Q9UGT4 822 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 EIF2B4Q9UI10 523 aaKnown RBP14.53□□□□□ -0.08
CPSF1-206ENST00000531480 GMEB2Q9UKD1 530 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 ZNF148Q9UQR1 794 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 SLCO1B1Q9Y6L6 691 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 SCN8AQ9UQD0 1980 aa14.53□□□□□ -0.08
CPSF1-206ENST00000531480 CAPN8A6NHC0 703 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 NPIPB15A6NHN6 443 aaPredicted RBP14.52□□□□□ -0.09
CPSF1-206ENST00000531480 PSMD11O00231 422 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 HEXIM1O94992 359 aaKnown RBP14.52□□□□□ -0.09
CPSF1-206ENST00000531480 PCDH8O95206 1070 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 NDST3O95803 873 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 ATXN1LP0C7T5 689 aaKnown RBP14.52□□□□□ -0.09
CPSF1-206ENST00000531480 ZNF806P0C7X5 589 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 LHCGRP22888 699 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 XPAP23025 273 aaPredicted RBP14.52□□□□□ -0.09
CPSF1-206ENST00000531480 MAOBP27338 520 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 PSMB4P28070 264 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 VIPR1P32241 457 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 GEMP55040 296 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 WNT3AP56704 352 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 RACK1P63244 317 aaKnown RBP14.52□□□□□ -0.09
CPSF1-206ENST00000531480 SNX1Q13596 522 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 QPCTQ16769 361 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 SETMARQ53H47 684 aaPredicted RBP14.52□□□□□ -0.09
CPSF1-206ENST00000531480 TTC27Q6P3X3 843 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 SLC23A3Q6PIS1 610 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 RANBP10Q6VN20 620 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 USP45Q70EL2 814 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 ARMCX6Q7L4S7 300 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 KIAA2013Q8IYS2 634 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.52□□□□□ -0.09
CPSF1-206ENST00000531480 GLIS1Q8NBF1 620 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 DENND6BQ8NEG7 585 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 CEP76Q8TAP6 659 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 PDCD6IPQ8WUM4 868 aaKnown RBP14.52□□□□□ -0.09
CPSF1-206ENST00000531480 CENPTQ96BT3 561 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 ARRDC1-AS1Q9H2J1 176 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 ARNT2Q9HBZ2 717 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 CAPN10Q9HC96 672 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 SMARCAL1Q9NZC9 954 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 AAR2Q9Y312 384 aaKnown RBP14.52□□□□□ -0.09
CPSF1-206ENST00000531480 NEU2Q9Y3R4 380 aa14.52□□□□□ -0.09
CPSF1-206ENST00000531480 A0A1B0GTW7 788 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 A0A1W2PR77 199 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 IGLON5A6NGN9 336 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 PRR5-ARHGAP8B1AHC4 643 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 PRAMEF26H0Y7S4 382 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 NEMP1O14524 444 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 BCAT2O15382 392 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-206ENST00000531480 MMP20O60882 483 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 PMPCBO75439 489 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 METTL18O95568 372 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 PRKCGP05129 697 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 CYP2A6P11509 494 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-206ENST00000531480 C6P13671 934 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 ZNF30P17039 623 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 HNF1BP35680 557 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 FNTAP49354 379 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 LIG3P49916 1009 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 FAM193AP78312 1265 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 MSLNQ13421 630 aaPredicted RBP14.51□□□□□ -0.09
CPSF1-206ENST00000531480 SLC1A5Q15758 541 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 CNGA3Q16281 694 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 CSRP2Q16527 193 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 DUOXA1Q1HG43 343 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 NAPEPLDQ6IQ20 393 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 C4orf22Q6V702 233 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 SYT10Q6XYQ8 523 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 ARHGEF18Q6ZSZ5 1173 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 NDUFAF2Q8N183 169 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 ATL2Q8NHH9 583 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 CXorf40AQ8TE69 158 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms