RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 A0A1B0GVT2 93 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 GOLGA6L9A6NEM1 432 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 KHNYNO15037 678 aaKnown RBP11.73□□□□□ -0.53
ACER3-210ENST00000531352 KCNN4O15554 427 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 GM2AP17900 193 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 XPAP23025 273 aaPredicted RBP11.73□□□□□ -0.53
ACER3-210ENST00000531352 HOXD12P35452 270 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 LIG3P49916 1009 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 CLDN2P57739 230 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 TMEM52BQ4KMG9 183 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 ARMC12Q5T9G4 340 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 FAXCQ5TGI0 409 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 TSPAN33Q86UF1 283 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 PAF1Q8N7H5 531 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 TMEM145Q8NBT3 493 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 OXNAD1Q96HP4 312 aaPredicted RBP11.73□□□□□ -0.53
ACER3-210ENST00000531352 CAPZA3Q96KX2 299 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 KCND1Q9NSA2 647 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 KLHL8Q9P2G9 620 aaPredicted RBP11.73□□□□□ -0.53
ACER3-210ENST00000531352 B4GALT6Q9UBX8 382 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 SNX12Q9UMY4 172 aa11.73□□□□□ -0.53
ACER3-210ENST00000531352 A0A1W2PR77 199 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 NPIPB15A6NHN6 443 aaPredicted RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 PDE2AO00408 941 aaPredicted RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 CDX4O14627 284 aaPredicted RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 LIASO43766 372 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 CPP00450 1065 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 ZSCAN5DPP0CG00 497 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 GNSP15586 552 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 ENGP17813 658 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 LHCGRP22888 699 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 CES1P23141 567 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 AFF3P51826 1226 aaKnown RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 POLR2LP62875 67 aaKnown RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 RACK1P63244 317 aaKnown RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 PRAMEF14Q5SWL7 426 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 KIAA1161Q6NSJ0 714 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 TTC27Q6P3X3 843 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 SYT10Q6XYQ8 523 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 LIPIQ6XZB0 460 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 MICALCLQ6ZW33 695 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 PRELID2Q8N945 189 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 TTC13Q8NBP0 860 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 CEP76Q8TAP6 659 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 SCRN2Q96FV2 425 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 C16orf45Q96MC5 204 aaPredicted RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 TRIB3Q96RU7 358 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 PCDH9Q9HC56 1237 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 PHTF1Q9UMS5 762 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 SLC6A14Q9UN76 642 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 PPIL1Q9Y3C6 166 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 A0A0J9YYE9 177 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 POM121BA6NF01 834 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 MTSS1O43312 755 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 PMPCBO75439 489 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 TRBC1P01850 177 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 C6P13671 934 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 HNF1BP35680 557 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 ELP6Q0PNE2 266 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 GRIK2Q13002 908 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 OASLQ15646 514 aaKnown RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 PCSK7Q16549 785 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 LONRF2Q1L5Z9 754 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 KIF19Q2TAC6 998 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 SETMARQ53H47 684 aaPredicted RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 ANKRD20A2Q5SQ80 823 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 ANKRD20A1Q5TYW2 823 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 ANKRD20A3Q5VUR7 823 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 ERAP2Q6P179 960 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 CDKL3Q8IVW4 592 aaPredicted RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 FUBP1Q96AE4 644 aaKnown RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 BMFQ96LC9 184 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 MCCC1Q96RQ3 725 aaPredicted RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 NUSAP1Q9BXS6 441 aaKnown RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 MBNL1Q9NR56 388 aaKnown RBP11.72□□□□□ -0.53
ACER3-210ENST00000531352 AASDHPPTQ9NRN7 309 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 SUSD2Q9UGT4 822 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 ZKSCAN5Q9Y2L8 839 aa11.72□□□□□ -0.53
ACER3-210ENST00000531352 GOLGA4Q13439 2230 aaKnown RBP11.71□□□□□ -0.53
ACER3-210ENST00000531352 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.71□□□□□ -0.53
ACER3-210ENST00000531352 PRAMEF26H0Y7S4 382 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 ARHGAP33O14559 1287 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 TM7SF2O76062 418 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 METTL18O95568 372 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 PIRTP0C851 137 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 HNRNPA2B1P22626 353 aaKnown RBP11.71□□□□□ -0.53
ACER3-210ENST00000531352 CD38P28907 300 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 CHRNA4P43681 627 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 SUOXP51687 545 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 GALNT3Q14435 633 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 CNGA3Q16281 694 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 NAPEPLDQ6IQ20 393 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 KDELC1Q6UW63 502 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 GCNT7Q6ZNI0 430 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 RFLNAQ6ZTI6 216 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 DPPA4Q7L190 304 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 PELI3Q8N2H9 469 aa11.71□□□□□ -0.53
ACER3-210ENST00000531352 CBARPQ8N350 705 aaPredicted RBP11.71□□□□□ -0.53
ACER3-210ENST00000531352 RASGEF1CQ8N431 466 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms