RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 RNF111Q6ZNA4 994 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 FAM43BQ6ZT52 329 aaPredicted RBP17.28■□□□□ 0.36
BRCA2-204ENST00000530893 SDCCAG8Q86SQ7 713 aaPredicted RBP17.28■□□□□ 0.36
BRCA2-204ENST00000530893 ABI1Q8IZP0 508 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 RCN3Q96D15 328 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 L3HYPDHQ96EM0 354 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 CDK5RAP1Q96SZ6 601 aaKnown RBP17.28■□□□□ 0.36
BRCA2-204ENST00000530893 PDP2Q9P2J9 529 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 ADAMTS6Q9UKP5 1117 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 PSMD13Q9UNM6 376 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 BPTFQ12830 3046 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 GREB1Q4ZG55 1949 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 H3BNX3 289 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 GLP2RO95838 553 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 ZDHHC11BP0C7U3 371 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 ELNP15502 786 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 STX5Q13190 355 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 ZNF235Q14590 738 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 ZNF423Q2M1K9 1284 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 MRNIPQ6NTE8 343 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 BBS5Q8N3I7 341 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 TTC9BQ8N6N2 239 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 DLG3Q92796 817 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 ASB2Q96Q27 587 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 CDRT15Q96T59 188 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 SEMA3CQ99985 751 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 TSEN34Q9BSV6 310 aaKnown RBP17.28■□□□□ 0.36
BRCA2-204ENST00000530893 WDR41Q9HAD4 459 aa17.28■□□□□ 0.36
BRCA2-204ENST00000530893 MRPL40Q9NQ50 206 aaKnown RBP17.28■□□□□ 0.36
BRCA2-204ENST00000530893 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.28■□□□□ 0.36
BRCA2-204ENST00000530893 MTMR11A4FU01 709 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 NEMP2A6NFY4 417 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 TMEM233B4DJY2 109 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 HNRNPLP14866 589 aaKnown RBP eCLIP17.27■□□□□ 0.36
BRCA2-204ENST00000530893 PAX7P23759 505 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 ELAVL2Q12926 359 aaKnown RBP17.27■□□□□ 0.36
BRCA2-204ENST00000530893 SQLEQ14534 574 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 RASIP1Q5U651 963 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 CUZD1Q86UP6 607 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 RNF135Q8IUD6 432 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 BRSK1Q8TDC3 778 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 UNKQ9C0B0 810 aaKnown RBP17.27■□□□□ 0.36
BRCA2-204ENST00000530893 PDFQ9HBH1 243 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 HACD3Q9P035 362 aa17.27■□□□□ 0.36
BRCA2-204ENST00000530893 TCAF2A6NFQ2 919 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 EIF4E1BA6NMX2 242 aaKnown RBP17.26■□□□□ 0.35
BRCA2-204ENST00000530893 ALDH2P05091 517 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 OGNP20774 298 aaKnown RBP17.26■□□□□ 0.35
BRCA2-204ENST00000530893 KCNA5P22460 613 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 ME2P23368 584 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 ARSDP51689 593 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 FLOT2Q14254 428 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 MGAT5BQ3V5L5 792 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 OR52E8Q6IFG1 317 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 ISCA2Q86U28 154 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 SLC43A3Q8NBI5 491 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 GPR152Q8TDT2 470 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 ANKRD49Q8WVL7 239 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 CEP295NLQ96MC4 621 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 MRPL1Q9BYD6 325 aaKnown RBP17.26■□□□□ 0.35
BRCA2-204ENST00000530893 G3BP2Q9UN86 482 aaKnown RBP17.26■□□□□ 0.35
BRCA2-204ENST00000530893 F5H5T6 163 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 H7C4K7 107 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 RPP40O75818 363 aaKnown RBP17.26■□□□□ 0.35
BRCA2-204ENST00000530893 SERPINF2P08697 491 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 TACR2P21452 398 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 FDXRP22570 491 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 SUOXP51687 545 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 THOP1P52888 689 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 CDKN2DP55273 166 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 HIPK4Q8NE63 616 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 BTBD9Q96Q07 612 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 GPR62Q9BZJ7 368 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 MAGEH1Q9H213 219 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 GSTO2Q9H4Y5 243 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 CYP4F12Q9HCS2 524 aa17.26■□□□□ 0.35
BRCA2-204ENST00000530893 CHD5Q8TDI0 1954 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 CD3EAPO15446 510 aaKnown RBP17.25■□□□□ 0.35
BRCA2-204ENST00000530893 TBC1D4O60343 1298 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 TLR5O60602 858 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 SMIM24O75264 130 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 LYNP07948 512 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 ENO3P13929 434 aaPredicted RBP17.25■□□□□ 0.35
BRCA2-204ENST00000530893 ETFBP38117 255 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 PSMD8P48556 350 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 TRIP10Q15642 601 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 OGFRL1Q5TC84 451 aaPredicted RBP17.25■□□□□ 0.35
BRCA2-204ENST00000530893 PQLC1Q8N2U9 271 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 EFCAB3Q8N7B9 438 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 RHEBL1Q8TAI7 183 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 TBATAQ96M53 351 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 SEPT5Q99719 369 aaPredicted RBP17.25■□□□□ 0.35
BRCA2-204ENST00000530893 RNF186Q9NXI6 227 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 MARCH4Q9P2E8 410 aaPredicted RBP17.25■□□□□ 0.35
BRCA2-204ENST00000530893 PCDHB7Q9Y5E2 793 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 UBDO15205 165 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 HMBSP08397 361 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 UQCRBP14927 111 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 CD1EP15812 388 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms