RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 LPCAT2Q7L5N7 544 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 GSTA5Q7RTV2 222 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 SLC41A1Q8IVJ1 513 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 TBC1D3Q8IZP1 549 aaPredicted RBP16.12■□□□□ 0.17
BRK1-201ENST00000530758 PDCD6IPQ8WUM4 868 aaKnown RBP16.12■□□□□ 0.17
BRK1-201ENST00000530758 SRPK1Q96SB4 655 aaKnown RBP16.12■□□□□ 0.17
BRK1-201ENST00000530758 C6orf106Q9H6K1 298 aaPredicted RBP16.12■□□□□ 0.17
BRK1-201ENST00000530758 ETNK1Q9HBU6 452 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 UBP1Q9NZI7 540 aa16.12■□□□□ 0.17
BRK1-201ENST00000530758 GOLGA6CA6NDK9 693 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 GOLGA6BA6NDN3 693 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 PMPCBO75439 489 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 SUN1O94901 812 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 AP2A1O95782 977 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 KRT14P02533 472 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 LMNAP02545 664 aaKnown RBP16.11■□□□□ 0.17
BRK1-201ENST00000530758 GOLGA6DP0CG33 693 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 ITIH2P19823 946 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 HLA-DPA1P20036 260 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 XPAP23025 273 aaPredicted RBP16.11■□□□□ 0.17
BRK1-201ENST00000530758 HNF1BP35680 557 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 RPS21P63220 83 aaKnown RBP16.11■□□□□ 0.17
BRK1-201ENST00000530758 RALGDSQ12967 914 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 SLC1A5Q15758 541 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 CDKN3Q16667 212 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 CEP68Q76N32 757 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 PRUNE1Q86TP1 453 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 HORMAD1Q86X24 394 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 ZNF592Q92610 1267 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 BIRC7Q96CA5 298 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 IFT43Q96FT9 208 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 ORAI3Q9BRQ5 295 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 C1QTNF2Q9BXJ5 285 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 MAGEE1Q9HCI5 957 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 GOLGA6AQ9NYA3 693 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 ZFR2Q9UPR6 939 aaKnown RBP16.11■□□□□ 0.17
BRK1-201ENST00000530758 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.11■□□□□ 0.17
BRK1-201ENST00000530758 MRFAP1Q9Y605 127 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 DMXL1Q9Y485 3027 aa16.11■□□□□ 0.17
BRK1-201ENST00000530758 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 CAPN8A6NHC0 703 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 ESPNB1AK53 854 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 PSMD11O00231 422 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 RNGTTO60942 597 aaKnown RBP16.1■□□□□ 0.17
BRK1-201ENST00000530758 GAS8O95995 478 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 CYP2A6P11509 494 aaPredicted RBP16.1■□□□□ 0.17
BRK1-201ENST00000530758 MAGEA6P43360 314 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 MSLNQ13421 630 aaPredicted RBP16.1■□□□□ 0.17
BRK1-201ENST00000530758 DHX34Q14147 1143 aaKnown RBP16.1■□□□□ 0.17
BRK1-201ENST00000530758 ELF2Q15723 593 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 ZNF284Q2VY69 593 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 PEAR1Q5VY43 1037 aaPredicted RBP16.1■□□□□ 0.17
BRK1-201ENST00000530758 DENND5AQ6IQ26 1287 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 CCDC70Q6NSX1 233 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 LIPIQ6XZB0 460 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 SYDE1Q6ZW31 735 aaPredicted RBP16.1■□□□□ 0.17
BRK1-201ENST00000530758 USP45Q70EL2 814 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 TMEFF1Q8IYR6 380 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 C1orf216Q8TAB5 229 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 LRRC40Q9H9A6 602 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 EIF2B3Q9NR50 452 aaKnown RBP16.1■□□□□ 0.17
BRK1-201ENST00000530758 B4GALT6Q9UBX8 382 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 GGT7Q9UJ14 662 aa16.1■□□□□ 0.17
BRK1-201ENST00000530758 A0A1W2PPC4 97 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 A0A1W2PQU0 124 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 PCDH8O95206 1070 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 ECEL1O95672 775 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 AGTP01019 485 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 FGF1P05230 155 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 ZNF30P17039 623 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 VIPR1P32241 457 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 DPP6P42658 865 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 PTGER3P43115 390 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 EPHB1P54762 984 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 FAM193AP78312 1265 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 CDK16Q00536 496 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 CKAP4Q07065 602 aaKnown RBP16.09■□□□□ 0.17
BRK1-201ENST00000530758 PCSK7Q16549 785 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 SIRPB2Q5JXA9 342 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 PDCD7Q8N8D1 485 aaKnown RBP16.09■□□□□ 0.17
BRK1-201ENST00000530758 LPCAT1Q8NF37 534 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 IPMKQ8NFU5 416 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 CCHCR1Q8TD31 782 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 LRRC45Q96CN5 670 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 RMDN1Q96DB5 314 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 LENG8Q96PV6 779 aaPredicted RBP16.09■□□□□ 0.17
BRK1-201ENST00000530758 SLC17A9Q9BYT1 436 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 EBF2Q9HAK2 575 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 RAB6BQ9NRW1 208 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 DMTF1Q9Y222 760 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 ITM2BQ9Y287 266 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 PLXNA2O75051 1894 aa16.09■□□□□ 0.17
BRK1-201ENST00000530758 NPIPB15A6NHN6 443 aaPredicted RBP16.08■□□□□ 0.16
BRK1-201ENST00000530758 FAM47DPA6NHR8 397 aa16.08■□□□□ 0.16
BRK1-201ENST00000530758 F5H423 210 aaPredicted RBP16.08■□□□□ 0.16
BRK1-201ENST00000530758 NEMP1O14524 444 aa16.08■□□□□ 0.16
BRK1-201ENST00000530758 HEXIM1O94992 359 aaKnown RBP16.08■□□□□ 0.16
BRK1-201ENST00000530758 PRKCGP05129 697 aa16.08■□□□□ 0.16
BRK1-201ENST00000530758 ALPIP09923 528 aa16.08■□□□□ 0.16
BRK1-201ENST00000530758 CTPS1P17812 591 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms