RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 LYVE1Q9Y5Y7 322 aa8.51□□□□□ -1.05
CTNND1-227ENST00000530748 NEDD8-MDP1E9PL57 170 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TLL1O43897 1013 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 CXCL14O95715 111 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 IL1BP01584 269 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 GJB1P08034 283 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TPSB2P20231 275 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ATP12AP54707 1039 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TPSAB1Q15661 275 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 MPPE1Q53F39 396 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 GCNT7Q6ZNI0 430 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 IKBIPQ70UQ0 350 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 STRADAQ7RTN6 431 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 YTHDF3Q7Z739 585 aaKnown RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 PRELID2Q8N945 189 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 UXS1Q8NBZ7 420 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 MAML3Q96JK9 1138 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 LGMNQ99538 433 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 HSD17B14Q9BPX1 270 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TTPALQ9BTX7 342 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 PCDH18Q9HCL0 1135 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 POLE3Q9NRF9 147 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 RPTORQ8N122 1335 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 GSAPA4D1B5 854 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 AZIN1O14977 448 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 EPHB6O15197 1021 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 MGRN1O60291 552 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ELFN1P0C7U0 828 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 NR2F1P10589 423 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 NR1D2Q14995 579 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 NRF1Q16656 503 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 PTPRNQ16849 979 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 NDUFAF6Q330K2 333 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 MZT2BQ6NZ67 158 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 CNSTQ6PJW8 725 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 MON1AQ86VX9 555 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 HEATR4Q86WZ0 1026 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ARMC8Q8IUR7 673 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 RASGEF1CQ8N431 466 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ZNF671Q8TAW3 534 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TM6SF2Q9BZW4 377 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 HMG20AQ9NP66 347 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 MAT2BQ9NZL9 334 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 RCOR3Q9P2K3 495 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 UBR1Q8IWV7 1749 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 CACNB4O00305 520 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TEX28O15482 410 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 STX11O75558 287 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 UNC5CO95185 931 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 GLUD1P00367 558 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 SLC35G4P0C7Q5 338 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ANPEPP15144 967 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 MARCKSL1P49006 195 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 MAXP61244 160 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 MTAPQ13126 283 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 PLA2G4EQ3MJ16 856 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 POTEHQ6S545 545 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 IRF2BP2Q7Z5L9 587 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 CROCCP3Q8IVE0 287 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ZBTB2Q8N680 514 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ZNF607Q96SK3 696 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 GINS4Q9BRT9 223 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 RTKNQ9BST9 563 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 FNDC11Q9BVV2 318 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TTLL2Q9BWV7 592 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 PRDM12Q9H4Q4 367 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ACSS3Q9H6R3 686 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ZFP14Q9HCL3 533 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 DNAJC28Q9NX36 388 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 SLC27A6Q9Y2P4 619 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 SNX3O60493 162 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 B4GALT4O60513 344 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 SNAP91O60641 907 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TGDSO95455 350 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 CST1P01037 141 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TPP2P29144 1249 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 GLUD2P49448 558 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 SPANXN2Q5MJ10 180 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 UBE2R2Q712K3 238 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TTC7BQ86TV6 843 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 GPR156Q8NFN8 814 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 RNASE11Q8TAA1 199 aaKnown RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 PTCD2Q8WV60 388 aaKnown RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 TIFAQ96CG3 184 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 BTN2A3PQ96KV6 586 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 VPS35Q96QK1 796 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 DGCR6LQ9BY27 220 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 NXF3Q9H4D5 531 aaKnown RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 KLHL31Q9H511 634 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 NEK6Q9HC98 313 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 INTS7Q9NVH2 962 aaKnown RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 LRRC14BA6NHZ5 514 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 DNTTP04053 509 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 HOXB6P17509 224 aaKnown RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ERCC2P18074 760 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 PPIBP23284 216 aaKnown RBP8.5□□□□□ -1.05
CTNND1-227ENST00000530748 ADSSP30520 456 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 GALNT18Q6P9A2 607 aa8.5□□□□□ -1.05
CTNND1-227ENST00000530748 SPATA6LQ8N4H0 392 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms