RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 PAFAH1B1P43034 410 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 CENPAP49450 140 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 EFNB1P98172 346 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 ROR2Q01974 943 aaKnown RBP6.05□□□□□ -1.44
PCF11-202ENST00000528336 CYP4A11Q02928 519 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 RUNX2Q13950 521 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 LPIN1Q14693 890 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 CCNG2Q16589 344 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 SLC45A4Q5BKX6 768 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 FSCBQ5H9T9 825 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 DNTTIP2Q5QJE6 756 aaKnown RBP6.05□□□□□ -1.44
PCF11-202ENST00000528336 FAM69AQ5T7M9 428 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 ITPRIPL1Q6GPH6 555 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 C9orf47Q6ZRZ4 202 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 GPAT4Q86UL3 456 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 FAM160B2Q86V87 743 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 TEX45Q8NA69 505 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 MIGA1Q8NAN2 632 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 TMEM170AQ8WVE7 144 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 RNF183Q96D59 192 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 RRP36Q96EU6 259 aaKnown RBP6.05□□□□□ -1.44
PCF11-202ENST00000528336 BARD1Q99728 777 aaKnown RBP6.05□□□□□ -1.44
PCF11-202ENST00000528336 HEMGNQ9BXL5 484 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 NUF2Q9BZD4 464 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 XPO4Q9C0E2 1151 aaKnown RBP6.05□□□□□ -1.44
PCF11-202ENST00000528336 SNTG1Q9NSN8 517 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 SPATS2LQ9NUQ6 558 aaKnown RBP6.05□□□□□ -1.44
PCF11-202ENST00000528336 HIF1ANQ9NWT6 349 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 SNX5Q9Y5X3 404 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 CCNB3Q8WWL7 1395 aa6.05□□□□□ -1.44
PCF11-202ENST00000528336 GPATCH8Q9UKJ3 1502 aaKnown RBP6.04□□□□□ -1.44
PCF11-202ENST00000528336 SYNRGQ9UMZ2 1314 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 FANCAO15360 1455 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 OR6C75A6NL08 312 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 A6NLC8 198 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 SMTNL1A8MU46 457 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 KDM4EB2RXH2 506 aaPredicted RBP6.04□□□□□ -1.44
PCF11-202ENST00000528336 TSPAN4O14817 238 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 ITM2AO43736 263 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 TFPIP10646 304 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 CTNNA1P35221 906 aaKnown RBP6.04□□□□□ -1.44
PCF11-202ENST00000528336 CDKN2AP42771 156 aaKnown RBP6.04□□□□□ -1.44
PCF11-202ENST00000528336 KCNJ4P48050 445 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 BLKP51451 505 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 UFM1P61960 85 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 YWHAZP63104 245 aaKnown RBP6.04□□□□□ -1.44
PCF11-202ENST00000528336 ZNF284Q2VY69 593 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 PLEKHO1Q53GL0 409 aaPredicted RBP6.04□□□□□ -1.44
PCF11-202ENST00000528336 MON1BQ7L1V2 547 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 ARL6IP6Q8N6S5 226 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 MCPH1Q8NEM0 835 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 ZMIZ2Q8NF64 920 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 ZCCHC10Q8TBK6 192 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 GPT2Q8TD30 523 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 MRPL9Q9BYD2 267 aaKnown RBP6.04□□□□□ -1.44
PCF11-202ENST00000528336 PAIP1Q9H074 479 aaKnown RBP6.04□□□□□ -1.44
PCF11-202ENST00000528336 CDT1Q9H211 546 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 VEZTQ9HBM0 779 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 SLC25A10Q9UBX3 287 aaPredicted RBP6.04□□□□□ -1.44
PCF11-202ENST00000528336 FZD10Q9ULW2 581 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 SRPRBQ9Y5M8 271 aaKnown RBP6.04□□□□□ -1.44
PCF11-202ENST00000528336 CYP46A1Q9Y6A2 500 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 ARHGAP5Q13017 1502 aa6.04□□□□□ -1.44
PCF11-202ENST00000528336 SUPT6HQ7KZ85 1726 aaKnown RBP6.03□□□□□ -1.44
PCF11-202ENST00000528336 MYO5CQ9NQX4 1742 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 CFAP74Q9C0B2 1584 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 AKNAQ7Z591 1439 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 SYNDIG1LA6NDD5 238 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 SPTLC2O15270 562 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 INSIG1O15503 277 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 TIPRLO75663 272 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 BAG2O95816 211 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 GALTP07902 379 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 EDN2P20800 178 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 DCTDP32321 178 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 TTKP33981 857 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 KRT9P35527 623 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 CLNS1AP54105 237 aaKnown RBP6.03□□□□□ -1.44
PCF11-202ENST00000528336 HNF4GQ14541 408 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 VEPH1Q14D04 833 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 BAK1Q16611 211 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 GLIPR1L2Q4G1C9 344 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 SERTAD4-AS1Q5TG53 156 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 NAA35Q5VZE5 725 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 TMEM81Q6P7N7 255 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 TADA2BQ86TJ2 420 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 RPAINQ86UA6 219 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 DENND6AQ8IWF6 608 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 KIAA2013Q8IYS2 634 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 TCP11L2Q8N4U5 519 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 OTUD6BQ8N6M0 293 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 TEX9Q8N6V9 391 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 PRR26Q8N8Z3 221 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 VMP1Q96GC9 406 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 WACQ9BTA9 647 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 MSTO1Q9BUK6 570 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 DCLK3Q9C098 648 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 HCN3Q9P1Z3 774 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 KIAA1456Q9P272 454 aa6.03□□□□□ -1.44
PCF11-202ENST00000528336 NFKBIL1Q9UBC1 381 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms