RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ZNF578Q96N58 590 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-212ENST00000527887 LRRC61Q9BV99 259 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 LCMT1Q9UIC8 334 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 DOLKQ9UPQ8 538 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 LUC7L2Q9Y383 392 aaKnown RBP14.28□□□□□ -0.12
CAPN1-212ENST00000527887 IGSF10Q6WRI0 2623 aa14.28□□□□□ -0.12
CAPN1-212ENST00000527887 DOCK9Q9BZ29 2069 aa14.27□□□□□ -0.12
CAPN1-212ENST00000527887 CPED1A4D0V7 1026 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 MYO1FO00160 1098 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 PDE2AO00408 941 aaPredicted RBP14.27□□□□□ -0.13
CAPN1-212ENST00000527887 TRAFD1O14545 582 aaPredicted RBP14.27□□□□□ -0.13
CAPN1-212ENST00000527887 BRINP1O60477 761 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 CYP1A2P05177 515 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 ELFN1P0C7U0 828 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 RARAP10276 462 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 TSHRP16473 764 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 IL1R2P27930 398 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 RGRP47804 291 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 CDH6P55285 790 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 ERVPABLB-1P60509 514 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 ZNF235Q14590 738 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 CDKN3Q16667 212 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 TBC1D25Q3MII6 688 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 IGF2-ASQ6U949 168 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 ENPP7Q6UWV6 458 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 LIPIQ6XZB0 460 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 DPPA4Q7L190 304 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 EFL1Q7Z2Z2 1120 aaKnown RBP14.27□□□□□ -0.13
CAPN1-212ENST00000527887 GKN2Q86XP6 184 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 RBFAQ8N0V3 343 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 PAF1Q8N7H5 531 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 CSPG4P5Q96PW8 444 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 POLR1BQ9H9Y6 1135 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.27□□□□□ -0.13
CAPN1-212ENST00000527887 COQ6Q9Y2Z9 468 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 DGKBQ9Y6T7 804 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 ATRXP46100 2492 aa14.27□□□□□ -0.13
CAPN1-212ENST00000527887 CACNB4O00305 520 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 TNFRSF10CO14798 259 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 HTRA2O43464 458 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 TLX3O43711 291 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 CSO75390 466 aaKnown RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 RECQL5O94762 991 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 TNFP01375 233 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 TRIM23P36406 574 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 KIAA1024LP59773 190 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 SRP54P61011 504 aaKnown RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 SLC10A7Q0GE19 358 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 C1orf61Q13536 156 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 HADHQ16836 314 aaKnown RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 ISXQ2M1V0 245 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 ALG11Q2TAA5 492 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 MARC1Q5VT66 337 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 GUSBP11Q6P575 273 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 ALKBH5Q6P6C2 394 aaKnown RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 ARHGAP36Q6ZRI8 547 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 ZSWIM9Q86XI8 627 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 SLC35F3Q8IY50 421 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 ARL10Q8N8L6 244 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 HSPH1Q92598 858 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 TRIM44Q96DX7 344 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 WDR92Q96MX6 357 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 DCBLD2Q96PD2 775 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 NUDCD1Q96RS6 583 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 CLPBQ9H078 707 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 THAP2Q9H0W7 228 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 TCEAL2Q9H3H9 227 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 HAUS2Q9NVX0 235 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 IFNKQ9P0W0 207 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 KLQ9UEF7 1012 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 ANAPC7Q9UJX3 599 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 PNMA8BQ9ULN7 279 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 PADI4Q9UM07 663 aa14.26□□□□□ -0.13
CAPN1-212ENST00000527887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.26□□□□□ -0.13
CAPN1-212ENST00000527887 TMX2-CTNND1H3BSU7 103 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 MUSKO15146 869 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 MAFKO60675 156 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 USP12O75317 370 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 PEX11BO96011 259 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 MYF5P13349 255 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 KRT10P13645 584 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 CR2P20023 1033 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 TGM2P21980 687 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 AMPD1P23109 780 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 MLLT3P42568 568 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-212ENST00000527887 SLC25A11Q02978 314 aaKnown RBP14.25□□□□□ -0.13
CAPN1-212ENST00000527887 RALGDSQ12967 914 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 SMTNL2Q2TAL5 461 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 RBM44Q6ZP01 1051 aaKnown RBP14.25□□□□□ -0.13
CAPN1-212ENST00000527887 HID1Q8IV36 788 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 NDUFAF2Q8N183 169 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 ATPAF2Q8N5M1 289 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 ZNF248Q8NDW4 579 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 OR56A4Q8NGH8 313 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 FAM71BQ8TC56 605 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 TSACCQ96A04 125 aaPredicted RBP14.25□□□□□ -0.13
CAPN1-212ENST00000527887 RBM15Q96T37 977 aaKnown RBP eCLIP14.25□□□□□ -0.13
CAPN1-212ENST00000527887 MGME1Q9BQP7 344 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 NUP85Q9BW27 656 aa14.25□□□□□ -0.13
CAPN1-212ENST00000527887 XPO4Q9C0E2 1151 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms