RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 ZNF175Q9Y473 711 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 COL4A3BPQ9Y5P4 624 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 KLF2Q9Y5W3 355 aaPredicted RBP3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 NFS1Q9Y697 457 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 CDC42BPBQ9Y5S2 1711 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 IQGAP1P46940 1657 aa3.77□□□□□ -1.81
CLNS1A-209ENST00000527299 PCDH11YQ9BZA8 1340 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CHD1O14646 1710 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CRYBG1Q9Y4K1 1723 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 TRPC5OSA6NMA1 111 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 A8MXQ7 604 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 EVPLLA8MZ36 301 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ATP6V1G2-DDX39BF2Z307 99 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 GOLGA8SH3BPF8 625 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ZNF701M0R085 212 aaPredicted RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 BTN3A1O00481 513 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 RAD51BO15315 384 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CTNND1O60716 968 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 RNASEH1O60930 286 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ITGA10O75578 1167 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 DNAJB5O75953 348 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 OR6B1O95007 311 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 PSMG1O95456 288 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 GAS8O95995 478 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 TFRCP02786 760 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CAPN1P07384 714 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CELA2AP08217 269 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 LTA4HP09960 611 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ICAM2P13598 275 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ITGA2P17301 1181 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 LRPAP1P30533 357 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 HADHAP40939 763 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 MMP13P45452 471 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 HARS2P49590 506 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 GDI2P50395 445 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CDK9P50750 372 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 POLGP54098 1239 aaPredicted RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 AK2P54819 239 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 EIF3BP55884 814 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 NRG3P56975 720 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 MYL6P60660 151 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 EIF4A1P60842 406 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 PRAMEP78395 509 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 RHAGQ02094 409 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ASPHQ12797 758 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CSTF3Q12996 717 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 PPP2R5CQ13362 524 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ZNF460Q14592 562 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 POU6F1Q14863 301 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 MTF1Q14872 753 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 C16orf72Q14CZ0 275 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 EFTUD2Q15029 972 aaKnown RBP eCLIP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 TSC22D1Q15714 1073 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 TAF12Q16514 161 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 DUSP7Q16829 419 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 TBRG1Q3YBR2 411 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 SUPT20HL1Q3ZLR7 823 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 C19orf54Q5BKX5 351 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 FAM209BQ5JX69 171 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 FAM205BPQ63HN1 556 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 PGM2L1Q6PCE3 622 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 OLFM4Q6UX06 510 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 C4orf50Q6ZRC1 276 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 C15orf52Q6ZUT6 534 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ESPNLQ6ZVH7 1005 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 EPM2AIP1Q7L775 607 aaPredicted RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 GPR142Q7Z601 462 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CCDC25Q86WR0 208 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 RALGPS2Q86X27 583 aaPredicted RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 STX12Q86Y82 276 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CNGA4Q8IV77 575 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 UNC45BQ8IWX7 931 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 MB21D2Q8IYB1 491 aaPredicted RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 LRRC34Q8IZ02 419 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 TCAIMQ8N3R3 496 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 OR8H1Q8NGG4 311 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 OR6S1Q8NH40 331 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 PHOSPHO2Q8TCD6 241 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 KCNG4Q8TDN1 519 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 SLC44A1Q8WWI5 657 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 SSH1Q8WYL5 1049 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 SEPT8Q92599 483 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 NCLNQ969V3 563 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 GRAMD1AQ96CP6 724 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ZNF486Q96H40 463 aaPredicted RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 PLEKHA8Q96JA3 519 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 LRGUKQ96M69 825 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CLUHP3Q96NS8 147 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 BTBD9Q96Q07 612 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 DEPDC7Q96QD5 511 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ELAC2Q9BQ52 826 aaKnown RBP3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ECSITQ9BQ95 431 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 FERMT1Q9BQL6 677 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 CCDC106Q9BWC9 280 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 ACAT2Q9BWD1 397 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 OR2B2Q9GZK3 357 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 HOXD1Q9GZZ0 328 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 LMAN2LQ9H0V9 348 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 WNT5BQ9H1J7 359 aa3.76□□□□□ -1.81
CLNS1A-209ENST00000527299 PABPC3Q9H361 631 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms