RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 UXTQ9UBK9 157 aaPredicted RBP10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 RIMS3Q9UJD0 308 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 PACSIN3Q9UKS6 424 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 RAB26Q9ULW5 256 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 TBC1D30Q9Y2I9 924 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 PSMD12O00232 456 aaPredicted RBP10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 SYN3O14994 580 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 MAP3K13O43283 966 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 RAMP2O60895 175 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 GPC4O75487 556 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 EPOP01588 193 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 CAPNS1P04632 268 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 HSPA13P48723 471 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 ATP4BP51164 291 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 YBEYP58557 167 aaPredicted RBP10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 PSME3P61289 254 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 MS4A2Q01362 244 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 ACVR1Q04771 509 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 EFEMP1Q12805 493 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 TRIM71Q2Q1W2 868 aaKnown RBP10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 LIN52Q52LA3 116 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 ALFQ53S48 1182 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 ZNF280DQ6N043 979 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 ZNF354CQ86Y25 554 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 ZNF280BQ86YH2 543 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 GALNT15Q8N3T1 639 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 KLHDC9Q8NEP7 349 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 GPR150Q8NGU9 434 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 ZFAND2BQ8WV99 257 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 ANKRD49Q8WVL7 239 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 USP13Q92995 863 aaPredicted RBP10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 TMA16Q96EY4 203 aaKnown RBP10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 ASB2Q96Q27 587 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 NPAS2Q99743 824 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 UNC93B1Q9H1C4 597 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 GSTO2Q9H4Y5 243 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 SUDS3Q9H7L9 328 aaPredicted RBP10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 SUCOQ9UBS9 1254 aaKnown RBP10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 NOD1Q9Y239 953 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 TRAF6Q9Y4K3 522 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 MRPL42Q9Y6G3 142 aaKnown RBP10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 FRMPD3Q5JV73 1810 aa10.84□□□□□ -0.67
PTPMT1-204ENST00000527079 CENPFP49454 3210 aa10.83□□□□□ -0.67
PTPMT1-204ENST00000527079 PRSS51A0A1B0GVH4 220 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 CCDC189A1A4V9 331 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 CAPN8A6NHC0 703 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 LDB2O43679 373 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 RTN3O95197 1032 aaPredicted RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 FGF1P05230 155 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 ATXN1LP0C7T5 689 aaKnown RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 HLA-DPA1P20036 260 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 CST5P28325 142 aaPredicted RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 MAPKAPK2P49137 400 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 CHN2P52757 468 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 FCGRTP55899 365 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 C1QTNF8P60827 252 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 CRHR2Q13324 411 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 SERINC3Q13530 473 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 LRP8Q14114 963 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 FASTKQ14296 549 aaKnown RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 POLD3Q15054 466 aaPredicted RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 ZNF678Q5SXM1 525 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 FBXL22Q6P050 247 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 UGT2A3Q6UWM9 527 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 GK5Q6ZS86 529 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 SLC24A5Q71RS6 500 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 ISCA2Q86U28 154 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 TICAM1Q8IUC6 712 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 COLGALT2Q8IYK4 626 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 FEM1CQ96JP0 617 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 SLC25A23Q9BV35 468 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 POLR1EQ9GZS1 481 aaKnown RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 POPDC3Q9HBV1 291 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 CACNA2D2Q9NY47 1150 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 RIMKLBQ9ULI2 386 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 PCDHGA7Q9Y5G6 932 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 TXNDC9O14530 226 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 B4GALT3O60512 393 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 SNRPB2P08579 225 aaKnown RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 FDXRP22570 491 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 YWHAQP27348 245 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 GPR15P49685 360 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 ACADVLP49748 655 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 ARSDP51689 593 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 CDKN2DP55273 166 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 USP46P62068 366 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 RING1Q06587 406 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 TRAP1Q12931 704 aaKnown RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 TRIM25Q14258 630 aaKnown RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 IHHQ14623 411 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 SDHAF4Q5VUM1 108 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 RAP1GAP2Q684P5 730 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 CCSAPQ6IQ19 270 aaPredicted RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 MRNIPQ6NTE8 343 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 HACD2Q6Y1H2 254 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 PCSK9Q8NBP7 692 aaKnown RBP10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 RIN3Q8TB24 985 aa10.83□□□□□ -0.68
PTPMT1-204ENST00000527079 IGSF8Q969P0 613 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms