RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 PRAMEF33A0A0G2JMD5 474 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 TMEM202A6NGA9 273 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 CREB3O43889 395 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 PRAMEF10O60809 474 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 UNGP13051 313 aaPredicted RBP16.2■□□□□ 0.18
PTPRU-210ENST00000527027 ITGB6P18564 788 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 MMP12P39900 470 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 ETV5P41161 510 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 GSCP56915 257 aaPredicted RBP16.2■□□□□ 0.18
PTPRU-210ENST00000527027 ARHGEF7Q14155 803 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 DPCR1Q3MIW9 517 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 TCP11X2Q5H9J9 407 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 ATG14Q6ZNE5 492 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 SPRED1Q7Z699 444 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 ZFAND4Q86XD8 727 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 CAMK1DQ8IU85 385 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 OR56A4Q8NGH8 313 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 USP7Q93009 1102 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 FUBP1Q96AE4 644 aaKnown RBP16.2■□□□□ 0.18
PTPRU-210ENST00000527027 PDXPQ96GD0 296 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 TUBGCP5Q96RT8 1024 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 SELENOOQ9BVL4 669 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 GANQ9H2C0 597 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 SAMSN1Q9NSI8 373 aaKnown RBP16.2■□□□□ 0.18
PTPRU-210ENST00000527027 PCDHB11Q9Y5F2 797 aa16.2■□□□□ 0.18
PTPRU-210ENST00000527027 UNC13CQ8NB66 2214 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 A0A1W2PQC6 194 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 SIGLEC16A6NMB1 481 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 AGRPO00253 132 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 CACNB4O00305 520 aaPredicted RBP16.19■□□□□ 0.18
PTPRU-210ENST00000527027 TERTO14746 1132 aaKnown RBP16.19■□□□□ 0.18
PTPRU-210ENST00000527027 TNFRSF10CO14798 259 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 SUV39H1O43463 412 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 NUDT21O43809 227 aaKnown RBP16.19■□□□□ 0.18
PTPRU-210ENST00000527027 RECQL5O94762 991 aaPredicted RBP16.19■□□□□ 0.18
PTPRU-210ENST00000527027 PRKCGP05129 697 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 HOXC4P09017 264 aaPredicted RBP16.19■□□□□ 0.18
PTPRU-210ENST00000527027 FAM87AP0C7U9 286 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 KELP23276 732 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 SOX5P35711 763 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 NSFP46459 744 aaKnown RBP16.19■□□□□ 0.18
PTPRU-210ENST00000527027 MAPK10P53779 464 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 KIAA1024LP59773 190 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 HLTFQ14527 1009 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPRU-210ENST00000527027 TBR1Q16650 682 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 C14orf28Q4W4Y0 310 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 VASH2Q86V25 355 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 ZSWIM9Q86XI8 627 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 DTX1Q86Y01 620 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 SLITRK4Q8IW52 837 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 SFTPA2Q8IWL1 248 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 PCDHB18PQ96TA0 734 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 TRIM4Q9C037 500 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 B3GNT4Q9C0J1 378 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 TMEM168Q9H0V1 697 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 DPEP2Q9H4A9 486 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 PDFQ9HBH1 243 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 FGF22Q9HCT0 170 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 DONSONQ9NYP3 566 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 DACH1Q9UI36 760 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 FZD10Q9ULW2 581 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 PCDHGA4Q9Y5G9 962 aa16.19■□□□□ 0.18
PTPRU-210ENST00000527027 C9orf172C9J069 976 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 J3KR12 359 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 FGF10O15520 208 aaPredicted RBP16.18■□□□□ 0.18
PTPRU-210ENST00000527027 CCP110O43303 1012 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 PRAMEF11O60813 436 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 CALB1P05937 261 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 EEF1GP26641 437 aaKnown RBP16.18■□□□□ 0.18
PTPRU-210ENST00000527027 TRIM23P36406 574 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 CSNK1DP48730 415 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 ZNF143P52747 638 aaPredicted RBP16.18■□□□□ 0.18
PTPRU-210ENST00000527027 NDST2P52849 883 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 POLR2FP61218 127 aaKnown RBP16.18■□□□□ 0.18
PTPRU-210ENST00000527027 NFKB2Q00653 900 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 B4GALNT1Q00973 533 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 PHF19Q5T6S3 580 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 SPECC1LQ69YQ0 1117 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 TMPRSS9Q7Z410 1059 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 SRLQ86TD4 932 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 PIM3Q86V86 326 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 PHF13Q86YI8 300 aaPredicted RBP16.18■□□□□ 0.18
PTPRU-210ENST00000527027 C3orf20Q8ND61 904 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 SEMA6CQ9H3T2 930 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 LRRC19Q9H756 370 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 ATP13A3Q9H7F0 1226 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 MRPL40Q9NQ50 206 aaKnown RBP16.18■□□□□ 0.18
PTPRU-210ENST00000527027 FOXJ2Q9P0K8 574 aa16.18■□□□□ 0.18
PTPRU-210ENST00000527027 FLNCQ14315 2725 aa16.17■□□□□ 0.18
PTPRU-210ENST00000527027 ANKRD62A6NC57 917 aa16.17■□□□□ 0.18
PTPRU-210ENST00000527027 B4DGG1 531 aa16.17■□□□□ 0.18
PTPRU-210ENST00000527027 WT1P19544 449 aaPredicted RBP16.17■□□□□ 0.18
PTPRU-210ENST00000527027 CD82P27701 267 aa16.17■□□□□ 0.18
PTPRU-210ENST00000527027 SERPINA4P29622 427 aa16.17■□□□□ 0.18
PTPRU-210ENST00000527027 KLK7P49862 253 aa16.17■□□□□ 0.18
PTPRU-210ENST00000527027 AIF1P55008 147 aa16.17■□□□□ 0.18
PTPRU-210ENST00000527027 JAM2P57087 298 aa16.17■□□□□ 0.18
PTPRU-210ENST00000527027 POLR2LP62875 67 aaKnown RBP16.17■□□□□ 0.18
PTPRU-210ENST00000527027 RALGDSQ12967 914 aa16.17■□□□□ 0.18
PTPRU-210ENST00000527027 CLEC16AQ2KHT3 1053 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms