RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 F5H423 210 aaPredicted RBP12.38□□□□□ -0.43
CTTN-210ENST00000525852 PRAMEF26H0Y7S4 382 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 FOXD2O60548 495 aaPredicted RBP12.38□□□□□ -0.43
CTTN-210ENST00000525852 CTPS1P17812 591 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 NFKB1P19838 968 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 HNRNPA2B1P22626 353 aaKnown RBP12.38□□□□□ -0.43
CTTN-210ENST00000525852 CD38P28907 300 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 CXCR5P32302 372 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 LIG3P49916 1009 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 CLDN2P57739 230 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 SGCGQ13326 291 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 TEAD4Q15561 434 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 ZNF569Q5MCW4 686 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 DPPA4Q7L190 304 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 CDKL3Q8IVW4 592 aaPredicted RBP12.38□□□□□ -0.43
CTTN-210ENST00000525852 SLC35F6Q8N357 371 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 NETO1Q8TDF5 533 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 ATG4AQ8WYN0 398 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 KLF6Q99612 283 aaPredicted RBP12.38□□□□□ -0.43
CTTN-210ENST00000525852 IL21RQ9HBE5 538 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 USP29Q9HBJ7 922 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 KLHL8Q9P2G9 620 aaPredicted RBP12.38□□□□□ -0.43
CTTN-210ENST00000525852 PHTF1Q9UMS5 762 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 SNX11Q9Y5W9 270 aa12.38□□□□□ -0.43
CTTN-210ENST00000525852 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTTN-210ENST00000525852 A0A0U1RQS6 177 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 A0A1W2PQ67 120 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 NPIPB15A6NHN6 443 aaPredicted RBP12.37□□□□□ -0.43
CTTN-210ENST00000525852 VILLO15195 856 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 KCNN4O15554 427 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 TM7SF2O76062 418 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 MT-CYBP00156 380 aaPredicted RBP12.37□□□□□ -0.43
CTTN-210ENST00000525852 SYPP08247 313 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 ALPIP09923 528 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 C6P13671 934 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 AKT2P31751 481 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 ARHGAP8P85298 464 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 STAT4Q14765 748 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 LIPIQ6XZB0 460 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 GCNT7Q6ZNI0 430 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 PID1Q7Z2X4 250 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 KDELC2Q7Z4H8 507 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 ZSCAN30Q86W11 494 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 MINDY1Q8N5J2 469 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 TTC13Q8NBP0 860 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 SLC35B2Q8TB61 432 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 ASB12Q8WXK4 309 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 CENPTQ96BT3 561 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 SCRN2Q96FV2 425 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 LENG8Q96PV6 779 aaPredicted RBP12.37□□□□□ -0.43
CTTN-210ENST00000525852 MCCC1Q96RQ3 725 aaPredicted RBP12.37□□□□□ -0.43
CTTN-210ENST00000525852 VAT1Q99536 393 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 CAAP1Q9H8G2 361 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 PCDH9Q9HC56 1237 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 TMEM9BQ9NQ34 198 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 UBP1Q9NZI7 540 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 TRHDEQ9UKU6 1024 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 CDV3Q9UKY7 258 aaKnown RBP12.37□□□□□ -0.43
CTTN-210ENST00000525852 DNPEPQ9ULA0 475 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 FNDC3AQ9Y2H6 1198 aaKnown RBP12.37□□□□□ -0.43
CTTN-210ENST00000525852 PPIL1Q9Y3C6 166 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 JRKLQ9Y4A0 524 aa12.37□□□□□ -0.43
CTTN-210ENST00000525852 TDRD6O60522 2096 aaKnown RBP12.37□□□□□ -0.43
CTTN-210ENST00000525852 POM121BA6NF01 834 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 GOLGA8CPA6NN73 597 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 TLR4O00206 839 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 ATP1A1P05023 1023 aaKnown RBP12.36□□□□□ -0.43
CTTN-210ENST00000525852 GM2AP17900 193 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 LHCGRP22888 699 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 VIPR1P32241 457 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 HNF1BP35680 557 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 CTSKP43235 329 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 SIX1Q15475 284 aaPredicted RBP12.36□□□□□ -0.43
CTTN-210ENST00000525852 CNGA3Q16281 694 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 PCSK7Q16549 785 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 HLA-BQ31612 363 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 UAP1L1Q3KQV9 507 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 PRAMEF14Q5SWL7 426 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 TSPAN33Q86UF1 283 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 FAM71DQ8N9W8 422 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 MFSD2AQ8NA29 543 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 LPCAT1Q8NF37 534 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 C1orf54Q8WWF1 131 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 OXNAD1Q96HP4 312 aaPredicted RBP12.36□□□□□ -0.43
CTTN-210ENST00000525852 BMFQ96LC9 184 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 TRIB3Q96RU7 358 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 GORASP1Q9BQQ3 440 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 MBNL1Q9NR56 388 aaKnown RBP12.36□□□□□ -0.43
CTTN-210ENST00000525852 DLL3Q9NYJ7 618 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 CACNA1AO00555 2505 aa12.36□□□□□ -0.43
CTTN-210ENST00000525852 PCNX2A6NKB5 2137 aa12.35□□□□□ -0.43
CTTN-210ENST00000525852 A0A0J9YYE9 177 aa12.35□□□□□ -0.43
CTTN-210ENST00000525852 SLC30A4O14863 429 aa12.35□□□□□ -0.43
CTTN-210ENST00000525852 LIASO43766 372 aa12.35□□□□□ -0.43
CTTN-210ENST00000525852 KIF5CO60282 957 aa12.35□□□□□ -0.43
CTTN-210ENST00000525852 CEP104O60308 925 aa12.35□□□□□ -0.43
CTTN-210ENST00000525852 PMPCBO75439 489 aa12.35□□□□□ -0.43
CTTN-210ENST00000525852 HEXIM1O94992 359 aaKnown RBP12.35□□□□□ -0.43
CTTN-210ENST00000525852 TRBC1P01850 177 aa12.35□□□□□ -0.43
CTTN-210ENST00000525852 FGGP02679 453 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms