RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 TAF8Q7Z7C8 310 aa24.1■■□□□ 1.45
USP47-205ENST00000525257 PHF13Q86YI8 300 aaPredicted RBP24.1■■□□□ 1.45
USP47-205ENST00000525257 SFTPA2Q8IWL1 248 aa24.1■■□□□ 1.45
USP47-205ENST00000525257 FAM46DQ8NEK8 389 aa24.1■■□□□ 1.45
USP47-205ENST00000525257 ZNF641Q96N77 438 aaPredicted RBP24.1■■□□□ 1.45
USP47-205ENST00000525257 MCEEQ96PE7 176 aa24.1■■□□□ 1.45
USP47-205ENST00000525257 FGF22Q9HCT0 170 aa24.1■■□□□ 1.45
USP47-205ENST00000525257 SEPT11Q9NVA2 429 aaKnown RBP24.1■■□□□ 1.45
USP47-205ENST00000525257 ACSL6Q9UKU0 697 aa24.1■■□□□ 1.45
USP47-205ENST00000525257 DGKBQ9Y6T7 804 aa24.1■■□□□ 1.45
USP47-205ENST00000525257 ANKRD62A6NC57 917 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 TMEM202A6NGA9 273 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 FGF10O15520 208 aaPredicted RBP24.09■■□□□ 1.45
USP47-205ENST00000525257 LIPCP11150 499 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 RGRP47804 291 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 KRT31Q15323 416 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 LINC00303Q3SY05 128 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 CERCAMQ5T4B2 595 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 MON1BQ7L1V2 547 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 OR56A4Q8NGH8 313 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 FUBP1Q96AE4 644 aaKnown RBP24.09■■□□□ 1.45
USP47-205ENST00000525257 SGF29Q96ES7 293 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 CELF6Q96J87 481 aaKnown RBP24.09■■□□□ 1.45
USP47-205ENST00000525257 NUP62CLQ9H1M0 184 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 LRRC19Q9H756 370 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 MRPL40Q9NQ50 206 aaKnown RBP24.09■■□□□ 1.45
USP47-205ENST00000525257 APPL1Q9UKG1 709 aa24.09■■□□□ 1.45
USP47-205ENST00000525257 B4DGG1 531 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 CACNB4O00305 520 aaPredicted RBP24.08■■□□□ 1.45
USP47-205ENST00000525257 NVLO15381 856 aaKnown RBP24.08■■□□□ 1.45
USP47-205ENST00000525257 PRAMEF11O60813 436 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 WISP1O95388 367 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 GLB1P16278 677 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 KIAA1024LP59773 190 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 TPI1P60174 286 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 RPL7AP62424 266 aaKnown RBP24.08■■□□□ 1.45
USP47-205ENST00000525257 SYCP1Q15431 976 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 FKBP15Q5T1M5 1219 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 SPRED1Q7Z699 444 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 EXTL1Q92935 676 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 TUBGCP5Q96RT8 1024 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 ARHGAP9Q9BRR9 750 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 FAM117AQ9C073 453 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 ATP13A3Q9H7F0 1226 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 GPATCH2LQ9NWQ4 482 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 HEMK1Q9Y5R4 338 aaPredicted RBP24.08■■□□□ 1.45
USP47-205ENST00000525257 RNF215Q9Y6U7 377 aa24.08■■□□□ 1.45
USP47-205ENST00000525257 PRAMEF33A0A0G2JMD5 474 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 TCRBV5S1A1TA0A578 114 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 PRAMEF10O60809 474 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 RECQL5O94762 991 aaPredicted RBP24.07■■□□□ 1.44
USP47-205ENST00000525257 SERPINA4P29622 427 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 ETV5P41161 510 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 AIF1P55008 147 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 RALGDSQ12967 914 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 OGFOD3Q6PK18 319 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 SRLQ86TD4 932 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 VASH2Q86V25 355 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 PAF1Q8N7H5 531 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 TSEN2Q8NCE0 465 aaKnown RBP24.07■■□□□ 1.44
USP47-205ENST00000525257 CNPY3Q9BT09 278 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 TMEM168Q9H0V1 697 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 LRIT1Q9P2V4 623 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 SIK3Q9Y2K2 1263 aa24.07■■□□□ 1.44
USP47-205ENST00000525257 CYSRT1A8MQ03 144 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 TPM2P07951 284 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 ELFN1P0C7U0 828 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 PAPOLAP51003 745 aaKnown RBP24.06■■□□□ 1.44
USP47-205ENST00000525257 NDST2P52849 883 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 MAPK10P53779 464 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 ZFP36L1Q07352 338 aaKnown RBP24.06■■□□□ 1.44
USP47-205ENST00000525257 ARHGEF7Q14155 803 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 C14orf28Q4W4Y0 310 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 CDKAL1Q5VV42 579 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 TMPRSS9Q7Z410 1059 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 ZFAND4Q86XD8 727 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 PCMTD1Q96MG8 357 aaPredicted RBP24.06■■□□□ 1.44
USP47-205ENST00000525257 TRIM4Q9C037 500 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 DPEP2Q9H4A9 486 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 CYP4F12Q9HCS2 524 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 FOXJ2Q9P0K8 574 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 MOSPD1Q9UJG1 213 aa24.06■■□□□ 1.44
USP47-205ENST00000525257 TLN1Q9Y490 2541 aaKnown RBP24.06■■□□□ 1.44
USP47-205ENST00000525257 PNLIPP16233 465 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 KELP23276 732 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 HLTFQ14527 1009 aaKnown RBP eCLIP24.05■■□□□ 1.44
USP47-205ENST00000525257 CT47A1Q5JQC4 288 aaPredicted RBP24.05■■□□□ 1.44
USP47-205ENST00000525257 MANEAQ5SRI9 462 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 PHF19Q5T6S3 580 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 SPECC1LQ69YQ0 1117 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 LIPIQ6XZB0 460 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 CCL4L1Q8NHW4 92 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 USP7Q93009 1102 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 SLC39A8Q9C0K1 460 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 SEPT10Q9P0V9 454 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 SPTA1P02549 2419 aa24.05■■□□□ 1.44
USP47-205ENST00000525257 BSNQ9UPA5 3926 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 CFAP69A5D8W1 941 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 ARHGAP42A6NI28 874 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms