RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ARHGAP40Q5TG30 622 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 KANK2Q63ZY3 851 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 FAM91A1Q658Y4 838 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ANKRD40Q6AI12 368 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 SLC9A4Q6AI14 798 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 RAET1GQ6H3X3 334 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 TMEM81Q6P7N7 255 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 CES3Q6UWW8 571 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ZPBP2Q6X784 338 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 LIPIQ6XZB0 460 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 GLDNQ6ZMI3 551 aaPredicted RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 C22orf34Q6ZV56 151 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 MTSS1LQ765P7 747 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 SPATA21Q7Z572 469 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 SLC22A9Q8IVM8 553 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 PM20D2Q8IYS1 436 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 OR4N4Q8N0Y3 316 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ABRAQ8N0Z2 381 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 LILRA2Q8N149 483 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 MCUQ8NE86 351 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 SLC24A4Q8NFF2 622 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 EXOC6Q8TAG9 804 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ACTRT2Q8TDY3 377 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 FBLIM1Q8WUP2 373 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 SYN2Q92777 582 aaPredicted RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 INPP5DQ92835 1189 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 DNASE1L2Q92874 299 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ARRDC3Q96B67 414 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 PHF21BQ96EK2 531 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 C14orf79Q96F83 325 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 MISP3Q96FF7 219 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 DHTKD1Q96HY7 919 aaPredicted RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 REXO5Q96IC2 774 aaKnown RBP4.54□□□□□ -1.68
CD44-213ENST00000525209 USP28Q96RU2 1077 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 MPHOSPH9Q99550 1183 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 DPYSL5Q9BPU6 564 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 SLC46A2Q9BY10 475 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 GPR61Q9BZJ8 451 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 P2RY12Q9H244 342 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 IKZF4Q9H2S9 585 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 EPB41L4BQ9H329 900 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 HRH4Q9H3N8 390 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 HAUS4Q9H6D7 363 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ECT2Q9H8V3 914 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 GCM1Q9NP62 436 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 KLC4Q9NSK0 619 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 OLAHQ9NV23 265 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.54□□□□□ -1.68
CD44-213ENST00000525209 HAO2Q9NYQ3 351 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 IL20Q9NYY1 176 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ERAP1Q9NZ08 941 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 HSPB7Q9UBY9 170 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 TRIM10Q9UDY6 481 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 VPS51Q9UID3 782 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 CARD8Q9Y2G2 431 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 MAB21L2Q9Y586 359 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 GMEB1Q9Y692 573 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 CDY1Q9Y6F8 540 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 ABCA5Q8WWZ7 1642 aa4.54□□□□□ -1.68
CD44-213ENST00000525209 GXYLT2A0PJZ3 443 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 SH3D21A4FU49 640 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 CFAP73A6NFT4 308 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 MBD3L5A6NJ08 208 aaPredicted RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 EIF3CLB5ME19 914 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 M0QYG6 137 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 PSMD9O00233 223 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 PER2O15055 1255 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 HS6ST1O60243 411 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 USP12O75317 370 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 SURF6O75683 361 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 RHBDL1O75783 438 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 OR6B1O95007 311 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 HSPA8P11142 646 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 ZNF3P17036 446 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 CTPS1P17812 591 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 GPTP24298 496 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 ACP1P24666 158 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 PTBP1P26599 531 aaKnown RBP eCLIP4.53□□□□□ -1.68
CD44-213ENST00000525209 PON1P27169 355 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 CRHR1P34998 444 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 BMI1P35226 326 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 LONP1P36776 959 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 FAM3BP58499 235 aaPredicted RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 TNFRSF17Q02223 184 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 GOLGA8FQ08AF8 430 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 OLIG2Q13516 323 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 GIT2Q14161 759 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 LPIN1Q14693 890 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 RCN1Q15293 331 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 CRB2Q5IJ48 1285 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 ARTNQ5T4W7 220 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 CACHD1Q5VU97 1274 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 TOM1L2Q6ZVM7 507 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 TAS1R1Q7RTX1 841 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 DGLUCYQ7Z3D6 616 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 PRRT2Q7Z6L0 340 aaPredicted RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 MTERF4Q7Z6M4 381 aaKnown RBP4.53□□□□□ -1.68
CD44-213ENST00000525209 AACSQ86V21 672 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 ZNF410Q86VK4 478 aa4.53□□□□□ -1.68
CD44-213ENST00000525209 NUDT13Q86X67 352 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms