RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CAPN8A6NHC0 703 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 A8MX80 341 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 CACNB4O00305 520 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 PDE2AO00408 941 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRAFD1O14545 582 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 WNT9AO14904 365 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 FLRT2O43155 660 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 GDF9O60383 454 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 PMPCBO75439 489 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 GJB3O75712 270 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 NDST3O95803 873 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 PRKCGP05129 697 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 PCCBP05166 539 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 PYGLP06737 847 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 ITGAVP06756 1048 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF883P0CG24 379 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 THEGLP0DJG4 465 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 CTPS1P17812 591 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 NFKB1P19838 968 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 KELP23276 732 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 PTPN3P26045 913 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 RBL1P28749 1068 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 CTSKP43235 329 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 GEMP55040 296 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 NXPH1P58417 271 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 YPEL5P62699 121 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 SKOR1P84550 965 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 MPP3Q13368 585 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 MTM1Q13496 603 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 HLA-BQ31612 363 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 P3H1Q32P28 736 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF569Q5MCW4 686 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 LAYNQ6UX15 382 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 Q6ZSR6 202 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 B4GALNT4Q76KP1 1039 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 DGLUCYQ7Z3D6 616 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 CCDC89Q8N998 374 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 TMEM145Q8NBT3 493 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 IPMKQ8NFU5 416 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 OR13H1Q8NG92 308 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 C1orf216Q8TAB5 229 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 ARRDC2Q8TBH0 407 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 SETD7Q8WTS6 366 aaKnown RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 NUS1Q96E22 293 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 SCRN2Q96FV2 425 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 IMP4Q96G21 291 aaKnown RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 TEKT5Q96M29 485 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 RBM15Q96T37 977 aaKnown RBP eCLIP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 ELF4Q99607 663 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 MLPHQ9BV36 600 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 GBA3Q9H227 469 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 ERVMER34-1Q9H9K5 563 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 FSCN3Q9NQT6 498 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 RAD18Q9NS91 495 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 TM7SF3Q9NS93 570 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 HOMER3Q9NSC5 361 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 EVA1BQ9NVM1 165 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 DNAAF2Q9NVR5 837 aaKnown RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRMT1Q9NXH9 659 aaKnown RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 FAM153AQ9UHL3 310 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 GGT7Q9UJ14 662 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF148Q9UQR1 794 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 CHKBQ9Y259 395 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZKSCAN5Q9Y2L8 839 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 AAR2Q9Y312 384 aaKnown RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 PCDHGB2Q9Y5G2 931 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 SNX11Q9Y5W9 270 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 HS3ST3A1Q9Y663 406 aa5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 NYNRINQ9P2P1 1898 aaKnown RBP5.42□□□□□ -1.54
HMGB1P40-201ENST00000525121 A0A0J9YYE9 177 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 GOLGA6L10A0A0M3HER8 536 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 C1orf232A0A0U1RR37 186 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 A0A1W2PR77 199 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 NEMP2A6NFY4 417 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 NPIPB15A6NHN6 443 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 E7EVH7 732 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 F5H423 210 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 H0Y8X5 98 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 CDX4O14627 284 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 PSMD3O43242 534 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 SPINT1O43278 529 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 CEP104O60308 925 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 RECQL5O94762 991 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 HEXIM1O94992 359 aaKnown RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 GAS8O95995 478 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRBC1P01850 177 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 FGGP02679 453 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC4A1P02730 911 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ALPIP09923 528 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ALPPL2P10696 532 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 TSHRP16473 764 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ITIH2P19823 946 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 HLA-DPA1P20036 260 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 STIP1P31948 543 aaKnown RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 HNF1BP35680 557 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 IGFALSP35858 605 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 GRK6P43250 576 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 LMAN1P49257 510 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 BLKP51451 505 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 NOVA1P51513 510 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms