RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CLDN23Q96B33 292 aa15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 STAMBPL1Q96FJ0 436 aa15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 SIGLEC10Q96LC7 697 aa15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 SRPK1Q96SB4 655 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 HDAC8Q9BY41 377 aa15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 SLC6A17Q9H1V8 727 aa15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 CHRDQ9H2X0 955 aa15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 CD248Q9HCU0 757 aa15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 POLR3BQ9NW08 1133 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 HACD3Q9P035 362 aa15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 SPO11Q9Y5K1 396 aa15.91■□□□□ 0.14
TSPAN4-213ENST00000524895 HEATR9A2RTY3 570 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 CRTAMO95727 393 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 SLC4A1P02730 911 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 CYP2A6P11509 494 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 TIMP2P16035 220 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 NDUFV2P19404 249 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 ADRA1DP25100 572 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 HNF1BP35680 557 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 MAGEA4P43358 317 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 SUOXP51687 545 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 FAM193AP78312 1265 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 ZBTB16Q05516 673 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 CNTN1Q12860 1018 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 CBLBQ13191 982 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 LAMB3Q13751 1172 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 GAS6Q14393 721 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 PCID2Q5JVF3 399 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 KIAA1324Q6UXG2 1013 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 AGGF1Q8N302 714 aaeCLIP15.9■□□□□ 0.141e-7■■■■□ 23.7
TSPAN4-213ENST00000524895 TSTD1Q8NFU3 115 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 GANCQ8TET4 914 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 PYROXD1Q8WU10 500 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 HMGB4Q8WW32 186 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 CAVIN3Q969G5 261 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 SIPA1Q96FS4 1042 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 SCRN2Q96FV2 425 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 SMIM14Q96QK8 99 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 MCCC1Q96RQ3 725 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 RANBP9Q96S59 729 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 EBNA1BP2Q99848 306 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 NAT9Q9BTE0 207 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 PABPC3Q9H361 631 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 TRABDQ9H4I3 376 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 MAGEE1Q9HCI5 957 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 PCDH12Q9NPG4 1184 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 BCCIPQ9P287 314 aaKnown RBP eCLIP15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 ZC3H7BQ9UGR2 993 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 SCML1Q9UN30 329 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 PPIL1Q9Y3C6 166 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 ZNF711Q9Y462 761 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 TCAF1Q9Y4C2 921 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 TEX264Q9Y6I9 313 aa15.9■□□□□ 0.14
TSPAN4-213ENST00000524895 MAGEB16A2A368 324 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 NPIPB15A6NHN6 443 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 PLK4O00444 970 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 RNASEH2AO75792 299 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 ALDH1A2O94788 518 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 PDGFBP01127 241 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 DCNP07585 359 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 ACADMP11310 421 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 ADRB3P13945 408 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 PGAM1P18669 254 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 P2RY2P41231 377 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 MAGEA9P43362 315 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 CCDC15Q0P6D6 951 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 SFSWAPQ12872 951 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 PTPRRQ15256 657 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 ARMC3Q5W041 872 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 CWF19L1Q69YN2 538 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 RELL1Q8IUW5 271 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 CCNJLQ8IV13 435 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 PGBD3Q8N328 593 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 SPEM1Q8N4L4 309 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 HDDC3Q8N4P3 179 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 AADATQ8N5Z0 425 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 BRSK1Q8TDC3 778 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 CFAP36Q96G28 342 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 MRGPRX1Q96LB2 322 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 C9orf72Q96LT7 481 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 LYSMD1Q96S90 227 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 OMDQ99983 421 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 WDR83Q9BRX9 315 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 IER2Q9BTL4 223 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 GPR63Q9BZJ6 419 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 CDC42EP4Q9H3Q1 356 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 B4GALT6Q9UBX8 382 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 SOX13Q9UN79 622 aa15.89■□□□□ 0.13
TSPAN4-213ENST00000524895 TRIOO75962 3097 aa15.88■□□□□ 0.13
TSPAN4-213ENST00000524895 ATG2BQ96BY7 2078 aa15.88■□□□□ 0.13
TSPAN4-213ENST00000524895 MYLKQ15746 1914 aa15.88■□□□□ 0.13
TSPAN4-213ENST00000524895 C1orf232A0A0U1RR37 186 aa15.88■□□□□ 0.13
TSPAN4-213ENST00000524895 A0A1W2PP55 124 aa15.88■□□□□ 0.13
TSPAN4-213ENST00000524895 CCDC78A2IDD5 438 aa15.88■□□□□ 0.13
TSPAN4-213ENST00000524895 TMEM221A6NGB7 291 aa15.88■□□□□ 0.13
TSPAN4-213ENST00000524895 C2orf81A6NN90 581 aa15.88■□□□□ 0.13
TSPAN4-213ENST00000524895 A8MX80 341 aa15.88■□□□□ 0.13
TSPAN4-213ENST00000524895 M0R296 226 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms