RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 KPNA3O00505 521 aaPredicted RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 PES1O00541 588 aaKnown RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 TOR1BO14657 336 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 AREL1O15033 823 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 TPD52L2O43399 206 aaKnown RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 TSPAN6O43657 245 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 KDELR3O43731 214 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 RFPL3O75679 317 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 GP1BAP07359 652 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 PLEKP08567 350 aaPredicted RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 THEGLP0DJG4 465 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 DGKAP23743 735 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 MAT2AP31153 395 aaKnown RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 AKT2P31751 481 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 HNF1BP35680 557 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 RECQLP46063 649 aaPredicted RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 NSFP46459 744 aaKnown RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 NUMBP49757 651 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 SUOXP51687 545 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 CCNHP51946 323 aaPredicted RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 ZNF143P52747 638 aaPredicted RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 YBEYP58557 167 aaPredicted RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 SNRPD1P62314 119 aaKnown RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 E2F1Q01094 437 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 IL9RQ01113 521 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 FGL2Q14314 439 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 SYCP1Q15431 976 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 STX1AQ16623 288 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 C15orf59Q2T9L4 293 aaPredicted RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 RAB6CQ53S08 254 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 ZNF805Q5CZA5 627 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 PRAMEF14Q5SWL7 426 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 FAM72AQ5TYM5 149 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 FAM72DQ6L9T8 149 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 PPP1R2P3Q6NXS1 205 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 WDR59Q6PJI9 974 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 DHRS13Q6UX07 377 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 LINGO4Q6UY18 593 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 KYAT3Q6YP21 454 aaKnown RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 GCNT7Q6ZNI0 430 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 IRF2BP2Q7Z5L9 587 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 SLFN11Q7Z7L1 901 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 FAM72BQ86X60 149 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 SLC22A18ASQ8N1D0 253 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 UMODL1-AS1Q8N2C9 162 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 EID2Q8N6I1 236 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 CCDC185Q8N715 623 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 RTL3Q8N8U3 475 aaKnown RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 DCBLD1Q8N8Z6 715 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 DENND6BQ8NEG7 585 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 ANKRD20A12PQ8NF67 263 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 OR2AP1Q8NGE2 309 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 OR4C6Q8NH72 309 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 SLC30A5Q8TAD4 765 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 MDM1Q8TC05 714 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 FAM172AQ8WUF8 416 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 TBC1D31Q96DN5 1066 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 ARHGEF26Q96DR7 871 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 SGSM3Q96HU1 749 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 FEM1CQ96JP0 617 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 BMFQ96LC9 184 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 TBATAQ96M53 351 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 GBP4Q96PP9 640 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 EIF3CQ99613 913 aaKnown RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 BPIFA3Q9BQP9 254 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 C11orf70Q9BRQ4 267 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 SLC17A9Q9BYT1 436 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 CPEB1Q9BZB8 566 aaKnown RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 RAB6CQ9H0N0 254 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 RBSNQ9H1K0 784 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 NOL6Q9H6R4 1146 aaKnown RBP6.08□□□□□ -1.44
FAM49B-228ENST00000523993 USP29Q9HBJ7 922 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 NLRC4Q9NPP4 1024 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 DYRK4Q9NR20 520 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 ADAM22Q9P0K1 906 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 DKK3Q9UBP4 350 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 CSNK1G3Q9Y6M4 447 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 COL6A6A6NMZ7 2263 aa6.08□□□□□ -1.44
FAM49B-228ENST00000523993 LY6G6EA0A0G2JKS1 128 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 TSPAN11A1L157 253 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 C16orf96A6NNT2 1141 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 A6NNZ2 444 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 TRIM38O00635 465 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 TPP1O14773 563 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 SCAMP1O15126 338 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 SLC31A1O15431 190 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 FGF10O15520 208 aaPredicted RBP6.07□□□□□ -1.44
FAM49B-228ENST00000523993 BNIP3LO60238 219 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 RAMP2O60895 175 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 PEX14O75381 377 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 PIAS2O75928 621 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 ATE1O95260 518 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 POP4O95707 220 aaKnown RBP6.07□□□□□ -1.44
FAM49B-228ENST00000523993 MBD3O95983 291 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 GHRHP01286 108 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 CSF2P04141 144 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 CCDC172P0C7W6 258 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 CKMT1AP12532 417 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 GZMAP12544 262 aa6.07□□□□□ -1.44
FAM49B-228ENST00000523993 ATP1A3P13637 1013 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms