RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 LIG3P49916 1009 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 NXPH1P58417 271 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 FAM193AP78312 1265 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 BNC1Q01954 994 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 NIPAL4Q0D2K0 466 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 RALGDSQ12967 914 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 KLF1Q13351 362 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-225ENST00000523950 ZNF211Q13398 564 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-225ENST00000523950 FGL2Q14314 439 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 ZNF423Q2M1K9 1284 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 LRRC73Q5JTD7 316 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 GCNT7Q6ZNI0 430 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 RAVER1Q8IY67 606 aaKnown RBP12.62□□□□□ -0.39
VEGFA-225ENST00000523950 LRRN4Q8WUT4 740 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 KLK6Q92876 244 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 RMDN1Q96DB5 314 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 SCRN2Q96FV2 425 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 IMP4Q96G21 291 aaKnown RBP12.62□□□□□ -0.39
VEGFA-225ENST00000523950 KLHDC7BQ96G42 594 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 AGAP3Q96P47 875 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 HERPUD2Q9BSE4 406 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 WRAP53Q9BUR4 548 aaKnown RBP12.62□□□□□ -0.39
VEGFA-225ENST00000523950 FRMD8P1Q9BZ68 369 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-225ENST00000523950 GLOD4Q9HC38 313 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 FSCN3Q9NQT6 498 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 SEPT10Q9P0V9 454 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 KLHL8Q9P2G9 620 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-225ENST00000523950 PCDHGB2Q9Y5G2 931 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 SNX11Q9Y5W9 270 aa12.62□□□□□ -0.39
VEGFA-225ENST00000523950 A0A0J9YYE9 177 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 H7C0C1 242 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 TM4SF5O14894 197 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 WNT9AO14904 365 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 LZTS3O60299 673 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-225ENST00000523950 STK10O94804 968 aaKnown RBP12.61□□□□□ -0.39
VEGFA-225ENST00000523950 TRBC1P01850 177 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 MMP2P08253 660 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 ELFN1P0C7U0 828 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 RBP3P10745 1247 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 ITIH2P19823 946 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 VIPR1P32241 457 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 CD86P42081 329 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 ATP5OP48047 213 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 EPHB1P54762 984 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 EIF3EP60228 445 aaKnown RBP12.61□□□□□ -0.39
VEGFA-225ENST00000523950 YPEL5P62699 121 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 SKOR1P84550 965 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 WASHC5Q12768 1159 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 HLA-BQ31612 363 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 LIPIQ6XZB0 460 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 PIH1D2Q8WWB5 315 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 TADA1Q96BN2 335 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 IFT43Q96FT9 208 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 PPP1R2P1Q96PQ5 205 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 ELF4Q99607 663 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-225ENST00000523950 KLF6Q99612 283 aaPredicted RBP12.61□□□□□ -0.39
VEGFA-225ENST00000523950 ADGRE3Q9BY15 652 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 KCNF1Q9H3M0 494 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 GAREM1Q9H706 876 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 PCDH9Q9HC56 1237 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 GPR27Q9NS67 375 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 B4GALT6Q9UBX8 382 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 ZNF292O60281 2723 aa12.61□□□□□ -0.39
VEGFA-225ENST00000523950 A0A1B0GTQ1 180 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 CAPN8A6NHC0 703 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 ZNF500O60304 480 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-225ENST00000523950 HEXIM1O94992 359 aaKnown RBP12.6□□□□□ -0.39
VEGFA-225ENST00000523950 PDHA1P08559 390 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 THEGLP0DJG4 465 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 ZNF30P17039 623 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 CSRP1P21291 193 aaKnown RBP12.6□□□□□ -0.39
VEGFA-225ENST00000523950 RBL1P28749 1068 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 RXRGP48443 463 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 ARRB1P49407 418 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-225ENST00000523950 CCT8P50990 548 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 ARHGEF7Q14155 803 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 SUZ12Q15022 739 aaKnown RBP12.6□□□□□ -0.39
VEGFA-225ENST00000523950 ITPRIPL1Q6GPH6 555 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 AADACL2Q6P093 401 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 LAYNQ6UX15 382 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 PID1Q7Z2X4 250 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 TP53I13Q8NBR0 393 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-225ENST00000523950 CENPTQ96BT3 561 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 BMFQ96LC9 184 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 FCRL5Q96RD9 977 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 LYSMD1Q96S90 227 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 SRPK1Q96SB4 655 aaKnown RBP12.6□□□□□ -0.39
VEGFA-225ENST00000523950 CEP41Q9BYV8 373 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 FZD3Q9NPG1 666 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 TM7SF3Q9NS93 570 aa12.6□□□□□ -0.39
VEGFA-225ENST00000523950 RAD51BO15315 384 aa12.59□□□□□ -0.39
VEGFA-225ENST00000523950 PCDHGA12O60330 932 aa12.59□□□□□ -0.39
VEGFA-225ENST00000523950 PRLP01236 227 aa12.59□□□□□ -0.39
VEGFA-225ENST00000523950 EPOP01588 193 aa12.59□□□□□ -0.39
VEGFA-225ENST00000523950 PRKCGP05129 697 aa12.59□□□□□ -0.39
VEGFA-225ENST00000523950 IGFALSP35858 605 aa12.59□□□□□ -0.39
VEGFA-225ENST00000523950 TNNT3P45378 269 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-225ENST00000523950 PFN3P60673 137 aa12.59□□□□□ -0.39
VEGFA-225ENST00000523950 MTM1Q13496 603 aa12.59□□□□□ -0.39
VEGFA-225ENST00000523950 PTK2BQ14289 1009 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms