RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ALOX12P18054 663 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 PTX3P26022 381 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 CHMLP26374 656 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 PBLDP30039 288 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 MATKP42679 507 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 ERVPABLB-1P60509 514 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 PPARDQ03181 441 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 GALNT1Q10472 559 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 CUL4AQ13619 759 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 OASLQ15646 514 aaKnown RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 TBR1Q16650 682 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 FAM209BQ5JX69 171 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 HAUS3Q68CZ6 603 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 GPR139Q6DWJ6 353 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 EFCAB12Q6NXP0 572 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 CD300LGQ6UXG3 332 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 ABHD15Q6UXT9 468 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 RALYLQ86SE5 291 aaKnown RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 GALNT7Q86SF2 657 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 NUP93Q8N1F7 819 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 CLRN3Q8NCR9 226 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 BHLHE22Q8NFJ8 381 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 BPIFB1Q8TDL5 484 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 IGDCC4Q8TDY8 1250 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 PIGOQ8TEQ8 1089 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 HMGB4Q8WW32 186 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 HTR3CQ8WXA8 447 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 RFFLQ8WZ73 363 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 DNASE2BQ8WZ79 361 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 ATP2A3Q93084 1043 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 MOCOSQ96EN8 888 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 TMEM41AQ96HV5 264 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 CNDP1Q96KN2 507 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 FAM84AQ96KN4 292 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 TIGD1Q96MW7 591 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 LZTS2Q9BRK4 669 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 NTPCRQ9BSD7 190 aaKnown RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 COLEC11Q9BWP8 271 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 AMNQ9BXJ7 453 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 B3GNT5Q9BYG0 378 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 CXCL16Q9H2A7 254 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 AZI2Q9H6S1 392 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 ZMAT4Q9H898 229 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 IL1RAPL2Q9NP60 686 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 DLL4Q9NR61 685 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 HAUS2Q9NVX0 235 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 ZNHIT6Q9NWK9 470 aaKnown RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF624Q9P2J8 865 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 HECAQ9UBI9 543 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 ITGB1BP2Q9UKP3 347 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 MAGED2Q9UNF1 606 aaPredicted RBP5.31□□□□□ -1.56
PABPC1-223ENST00000523636 CCL26Q9Y258 94 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 EXOC6BQ9Y2D4 811 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 HES2Q9Y543 173 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 CEP83Q9Y592 693 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 INSL5Q9Y5Q6 135 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 UBIAD1Q9Y5Z9 338 aa5.31□□□□□ -1.56
PABPC1-223ENST00000523636 SF3B1O75533 1304 aaKnown RBP eCLIP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 CNTNAP2Q9UHC6 1331 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 A0A087WZ62 844 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 CCDC196A0A1B0GTZ2 297 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 PMS2P1A4D2B8 440 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 MEIS2O14770 477 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 IRAK2O43187 625 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 ZBTB43O43298 467 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 H2AFYO75367 372 aaKnown RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 VNN2O95498 520 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 CER1O95813 267 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 PRKCGP05129 697 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 MMEP08473 750 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 WT1P19544 449 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 IL11P20809 199 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 GNLYP22749 145 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 TMOD1P28289 359 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 MC4RP32245 332 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 HOXD13P35453 343 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 SREBF1P36956 1147 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 EPHB3P54753 998 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 PTH1RQ03431 593 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 STARD3Q14849 445 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 HS1BP3Q53T59 392 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 KCNT1Q5JUK3 1230 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 CYP4A22Q5TCH4 519 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 ESRP1Q6NXG1 681 aaKnown RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 PGBD2Q6P3X8 592 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 USP17L6PQ6QN14 398 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 FRMD7Q6ZUT3 714 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 RUFY3Q7L099 469 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 CEP97Q8IW35 865 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 OR8H3Q8N146 312 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 ZCCHC9Q8N567 271 aaKnown RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 ALLCQ8N6M5 410 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 LINC00482Q8N8I6 264 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 DTX3Q8N9I9 347 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 IL17RCQ8NAC3 791 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF527Q8NB42 609 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 TOR1AIP2Q8NFQ8 470 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 SPATA3Q8NHX4 192 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 KCNN1Q92952 543 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 CD101Q93033 1021 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms