RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 CCDC3Q9BQI4 270 aa11.83□□□□□ -0.52
CTNNA1-237ENST00000523275 ZWILCHQ9H900 591 aa11.83□□□□□ -0.52
CTNNA1-237ENST00000523275 ASCL3Q9NQ33 180 aa11.83□□□□□ -0.52
CTNNA1-237ENST00000523275 THSD1Q9NS62 852 aa11.83□□□□□ -0.52
CTNNA1-237ENST00000523275 KLQ9UEF7 1012 aa11.83□□□□□ -0.52
CTNNA1-237ENST00000523275 SEPT3Q9UH03 358 aa11.83□□□□□ -0.52
CTNNA1-237ENST00000523275 SATB2Q9UPW6 733 aa11.83□□□□□ -0.52
CTNNA1-237ENST00000523275 ENTPD2Q9Y5L3 495 aa11.83□□□□□ -0.52
CTNNA1-237ENST00000523275 A0A1B0GTH6 734 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 A0A1W2PNU3 283 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 H3BRJ5 948 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 TK2O00142 265 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 ATXN7O15265 892 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 RECQL5O94762 991 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 TNFP01375 233 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 PCCBP05166 539 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 SKILP12757 684 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 PCK1P35558 622 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 AP1S1P61966 158 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 SLC10A7Q0GE19 358 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 RALGDSQ12967 914 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 DPYSQ14117 519 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 LBRQ14739 615 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 NR1I3Q14994 352 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 BOLA3Q53S33 107 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 C3orf38Q5JPI3 329 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 BROXQ5VW32 411 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 LIPIQ6XZB0 460 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 GKN2Q86XP6 184 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 ARL10Q8N8L6 244 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 PLA2G15Q8NCC3 412 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 LSM14AQ8ND56 463 aaKnown RBP11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 PCDH19Q8TAB3 1148 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 KCNE4Q8WWG9 221 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 ZNF599Q96NL3 588 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 SLC46A1Q96NT5 459 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 ISCUQ9H1K1 167 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 SIRPGQ9P1W8 387 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 MYO1AQ9UBC5 1043 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 GPR34Q9UPC5 381 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 PCDHGA8Q9Y5G5 932 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 DGKBQ9Y6T7 804 aa11.82□□□□□ -0.52
CTNNA1-237ENST00000523275 TEX51A0A1B0GUA7 166 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 A8MX80 341 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 CACNB4O00305 520 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 NTN3O00634 580 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 TRAFD1O14545 582 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 SERPINC1P01008 464 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 HOXC4P09017 264 aaPredicted RBP11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 ELFN1P0C7U0 828 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 KELP23276 732 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 HSPA9P38646 679 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 ARL4AP40617 200 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 UCNP55089 124 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 KIAA1024LP59773 190 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 CXADRP78310 365 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 SPIDRQ14159 915 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 TCEA2Q15560 299 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 TMCO4Q5TGY1 634 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 DPPA4Q7L190 304 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 TP53INP2Q8IXH6 220 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 KYQ8NBH2 561 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 OR56A4Q8NGH8 313 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 WDR36Q8NI36 951 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 SLC39A7Q92504 469 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 FUBP1Q96AE4 644 aaKnown RBP11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 CCDC74AQ96AQ1 378 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 NSMCE3Q96MG7 304 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 RBM15Q96T37 977 aaKnown RBP eCLIP11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 DPH1Q9BZG8 443 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 SYNDIG1Q9H7V2 258 aa11.81□□□□□ -0.52
CTNNA1-237ENST00000523275 RP1P56715 2156 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 CCDC187A0A096LP49 1063 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 A0A1W2PQ67 120 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 TTC24A2A3L6 582 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 TMEM202A6NGA9 273 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 TMX2-CTNND1H3BSU7 103 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 TNFRSF10CO14798 259 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 CASC3O15234 703 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 KLK10O43240 276 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 AMPD1P23109 780 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 IL1R2P27930 398 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 TRIM23P36406 574 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 MLLT3P42568 568 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 TMPRSS3P57727 454 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 PIGHQ14442 188 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 ZNF235Q14590 738 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 IQCB1Q15051 598 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 ACOX1Q15067 660 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 DPYSL2Q16555 572 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 FIGNQ5HY92 759 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 KCTD16Q68DU8 428 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 CAVIN1Q6NZI2 390 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 PNCKQ6P2M8 343 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 FOXR1Q6PIV2 292 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 OGFOD3Q6PK18 319 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 TMCO3Q6UWJ1 677 aa11.8□□□□□ -0.52
CTNNA1-237ENST00000523275 POLNQ7Z5Q5 900 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms