RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 MYBL1P10243 752 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 IL1R2P27930 398 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 GJC1P36383 396 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 CSNK1DP48730 415 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 BLKP51451 505 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 UBASH3AP57075 661 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 SRP54P61011 504 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 POLR2LP62875 67 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 IL10RBQ08334 325 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 ITKQ08881 620 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 SLC10A7Q0GE19 358 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 KRT81Q14533 505 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 ZNF235Q14590 738 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 LBRQ14739 615 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 ELOCQ15369 112 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 ISXQ2M1V0 245 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 ALG11Q2TAA5 492 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 BOLA3Q53S33 107 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 C3orf38Q5JPI3 329 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 PERM1Q5SV97 790 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 CDCP2Q5VXM1 449 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 AFMIDQ63HM1 303 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 TMCO3Q6UWJ1 677 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 SLC35F3Q8IY50 421 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 ATXN7L3BQ96GX2 97 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 TUBGCP5Q96RT8 1024 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 LGMNQ99538 433 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 EIF3CQ99613 913 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 EDEM3Q9BZQ6 932 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 GRPEL1Q9HAV7 217 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 ETNK2Q9NVF9 386 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 KLQ9UEF7 1012 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 SEPT3Q9UH03 358 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 GPR34Q9UPC5 381 aa10.3□□□□□ -0.76
CTNNA1-235ENST00000522730 KALRNO60229 2985 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 EME2A4GXA9 379 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 GOLGA6CA6NDK9 693 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 GOLGA6BA6NDN3 693 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 ALPIP09923 528 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 ELFN1P0C7U0 828 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 GOLGA6DP0CG33 693 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 RARAP10276 462 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 RBMS1P29558 406 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 MMP12P39900 470 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 HCAR3P49019 387 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 PEX5P50542 639 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 RENBPP51606 427 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 HK3P52790 923 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 MAXP61244 160 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 NSUN2Q08J23 767 aaKnown RBP eCLIP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 DPYSQ14117 519 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 RFTN1Q14699 578 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 NFATC4Q14934 902 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 TBC1D25Q3MII6 688 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 CCDC122Q5T0U0 273 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 C6orf132Q5T0Z8 1188 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 TXNRD3NBQ6F5E7 133 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 RBM44Q6ZP01 1051 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 CYP4V2Q6ZWL3 525 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 TAF8Q7Z7C8 310 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 PSTKQ8IV42 348 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 CACTIN-AS1Q8N1I8 211 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 LZTR1Q8N653 840 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 Q8N9G6 341 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 PCDH19Q8TAB3 1148 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 FNIP1Q8TF40 1166 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 NSMCE1Q8WV22 266 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 NSMCE3Q96MG7 304 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 WDR92Q96MX6 357 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 BBC3Q96PG8 261 aaPredicted RBP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 CCDC3Q9BQI4 270 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 NUP85Q9BW27 656 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 BOCQ9BWV1 1114 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 THAP2Q9H0W7 228 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 ISCUQ9H1K1 167 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 POLR1BQ9H9Y6 1135 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 NOD2Q9HC29 1040 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 MRPL40Q9NQ50 206 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 GOLGA6AQ9NYA3 693 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 ANAPC7Q9UJX3 599 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 SATB2Q9UPW6 733 aa10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 BZW2Q9Y6E2 419 aaKnown RBP10.29□□□□□ -0.76
CTNNA1-235ENST00000522730 MGAQ8IWI9 3026 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 CHD5Q8TDI0 1954 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 TSPAN11A1L157 253 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 TMEM202A6NGA9 273 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 CACNB4O00305 520 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 TOR1BO14657 336 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 SERPING1P05155 500 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 CTPS1P17812 591 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 PCK1P35558 622 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 LSSP48449 732 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 CDH6P55285 790 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 CXADRP78310 365 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 CCL7P80098 99 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 RALGDSQ12967 914 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 MMRN1Q13201 1228 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 PIGHQ14442 188 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 ACAP1Q15027 740 aa10.28□□□□□ -0.76
CTNNA1-235ENST00000522730 PTPRRQ15256 657 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms