RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CCINQ13939 588 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 POU6F1Q14863 301 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 CRYMQ14894 314 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 KYNUQ16719 465 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 SPANXN3Q5MJ09 141 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF449Q6P9G9 518 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF852Q6ZMS4 543 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 KDELC2Q7Z4H8 507 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 TMEM135Q86UB9 458 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 IGDCC3Q8IVU1 814 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 PALM2Q8IXS6 379 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 UBALD2Q8IYN6 164 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 CHPFQ8IZ52 775 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 NDUFAF2Q8N183 169 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF366Q8N895 744 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 TMIEQ8NEW7 156 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 GSDMBQ8TAX9 411 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 GRIN3AQ8TCU5 1115 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 PDCD6IPQ8WUM4 868 aaKnown RBP13.13□□□□□ -0.31
CPNE3-205ENST00000522240 PIH1D2Q8WWB5 315 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 LYSMD1Q96S90 227 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 ACOX2Q99424 681 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 TRABDQ9H4I3 376 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 LRRC4CQ9HCJ2 640 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 WNT16Q9UBV4 365 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 PHTF1Q9UMS5 762 aa13.13□□□□□ -0.31
CPNE3-205ENST00000522240 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.13□□□□□ -0.31
CPNE3-205ENST00000522240 TRIOO75962 3097 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 A0A0J9YYE9 177 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 CAPN8A6NHC0 703 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 C1QTNF3-AMACRE9PGA6 284 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 MAP2K7O14733 419 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 ACSL3O95573 720 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 TRBC1P01850 177 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 CTSLP07711 333 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 SEC13P55735 322 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 EIF3BP55884 814 aaKnown RBP13.12□□□□□ -0.31
CPNE3-205ENST00000522240 GPX6P59796 221 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 POLR2LP62875 67 aaKnown RBP13.12□□□□□ -0.31
CPNE3-205ENST00000522240 CRADDP78560 199 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 SLC29A2Q14542 456 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF805Q5CZA5 627 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 HP1BP3Q5SSJ5 553 aaPredicted RBP13.12□□□□□ -0.31
CPNE3-205ENST00000522240 SDE2Q6IQ49 451 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 PKN3Q6P5Z2 889 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 LRIG3Q6UXM1 1119 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 UNC5AQ6ZN44 842 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 USP45Q70EL2 814 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 CYS1Q717R9 158 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 STK40Q8N2I9 435 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 IL17RCQ8NAC3 791 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 BRSK1Q8TDC3 778 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 CFAP36Q96G28 342 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 PPP1R16AQ96I34 528 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 PKNOX2Q96KN3 472 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 KLHL32Q96NJ5 620 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 MCCC1Q96RQ3 725 aaPredicted RBP13.12□□□□□ -0.31
CPNE3-205ENST00000522240 C19orf43Q9BQ61 176 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 KCNH6Q9H252 994 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 MTG2Q9H4K7 406 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 VPS37BQ9H9H4 285 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 PLAC1Q9HBJ0 212 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 MAGEE1Q9HCI5 957 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 PRSS16Q9NQE7 514 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF446Q9NWS9 450 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.12□□□□□ -0.31
CPNE3-205ENST00000522240 MRPS17Q9Y2R5 130 aaKnown RBP13.12□□□□□ -0.31
CPNE3-205ENST00000522240 MYO10Q9HD67 2058 aa13.12□□□□□ -0.31
CPNE3-205ENST00000522240 F5P12259 2224 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 MROH6A6NGR9 719 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 UPK3BL1B0FP48 263 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 UPK3BL2E5RIL1 263 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 CRTAMO95727 393 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 TPH1P17752 444 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 PAMP19021 973 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 ITGB7P26010 798 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 PRSS12P56730 875 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 PDE1BQ01064 536 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 SEPT6Q14141 434 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 LRRC32Q14392 662 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 STAT4Q14765 748 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 STARD3Q14849 445 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 TAF1AQ15573 450 aaPredicted RBP13.11□□□□□ -0.31
CPNE3-205ENST00000522240 ANKRD20A4Q4UJ75 823 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 UBAP2Q5T6F2 1119 aaKnown RBP13.11□□□□□ -0.31
CPNE3-205ENST00000522240 TSTD2Q5T7W7 516 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 EMC10Q5UCC4 262 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 ALS2CLQ60I27 953 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 KIAA0930Q6ICG6 404 aaPredicted RBP13.11□□□□□ -0.31
CPNE3-205ENST00000522240 GLT6D1Q7Z4J2 308 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 ZSWIM9Q86XI8 627 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 IQCKQ8N0W5 287 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 SYNPOQ8N3V7 929 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 PAF1Q8N7H5 531 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
CPNE3-205ENST00000522240 PIP4K2CQ8TBX8 421 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 BLOC1S5Q8TDH9 187 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 ZNF669Q96BR6 464 aaPredicted RBP13.11□□□□□ -0.31
CPNE3-205ENST00000522240 SHDQ96IW2 340 aa13.11□□□□□ -0.31
CPNE3-205ENST00000522240 FAM129BQ96TA1 746 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms