RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 TMEM65Q6PI78 240 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 TRIM72Q6ZMU5 477 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 BBS12Q6ZW61 710 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 CCDC186Q7Z3E2 898 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 MAATS1Q7Z4T9 603 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 TFAP2DQ7Z6R9 452 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 PLA2G4DQ86XP0 818 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 NELFCDQ8IXH7 590 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 SCYL3Q8IZE3 742 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 ADGRF3Q8IZF5 1079 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 VPS52Q8N1B4 723 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 GALNT4Q8N4A0 578 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 GMCL1P1Q8NEA9 526 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 SLC2A12Q8TD20 617 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 NOC3LQ8WTT2 800 aaKnown RBP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 CCDC12Q8WUD4 166 aaPredicted RBP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 GLMPQ8WWB7 406 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 NELFBQ8WX92 580 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 DCPSQ96C86 337 aaKnown RBP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 SDCCAG3Q96C92 435 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 DAZAP1Q96EP5 407 aaKnown RBP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 CDCA5Q96FF9 252 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 MPP4Q96JB8 637 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 PPM1MQ96MI6 270 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 BBC3Q96PG8 261 aaPredicted RBP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 SLF1Q9BQI6 1058 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 SH2D3AQ9BRG2 576 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 KRTAP9-9Q9BYP9 154 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 XPO4Q9C0E2 1151 aaKnown RBP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 CTDSP1Q9GZU7 261 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 ZMYND12Q9H0C1 365 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 R3HDMLQ9H3Y0 253 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 PRDM13Q9H4Q3 707 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 VCPKMTQ9H867 229 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 PRDM16Q9HAZ2 1276 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 PDE11AQ9HCR9 933 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 MLXIPLQ9NP71 852 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 UBN1Q9NPG3 1134 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 SH3GLB2Q9NR46 395 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 SAMSN1Q9NSI8 373 aaKnown RBP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 PGAP2Q9UHJ9 254 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 FBXO4Q9UKT5 387 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 BAG5Q9UL15 447 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 NFU1Q9UMS0 254 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 HEMK1Q9Y5R4 338 aaPredicted RBP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 COPG1Q9Y678 874 aaKnown RBP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 PSME4Q14997 1843 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 SYNRGQ9UMZ2 1314 aa2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 BRCA1P38398 1863 aaKnown RBP2.88□□□□□ -1.95
CKS1BP7-201ENST00000522230 GREB1LQ9C091 1923 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 SSC5DA1L4H1 1573 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 ATAD5Q96QE3 1844 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 ARFGEF1Q9Y6D6 1849 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 A0A087X1B8 175 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 CCDC151A5D8V7 595 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 MYMKA6NI61 221 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 MBD3L5A6NJ08 208 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 NPIPB13A6NJU9 1138 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 NPIPB5A8MRT5 1133 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 RSPH10B2B2RC85 870 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 NPIPB4C9JG80 1138 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 FAM86B1E9PN63 330 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 GCOM1H8Y6P7 765 aaPredicted RBP2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 RRHO14718 337 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 MEIS2O14770 477 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 MSH4O15457 936 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 ZBED4O75132 1171 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 MED24O75448 989 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 TBX18O95935 607 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 BMP15O95972 392 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 MT-CO3P00414 261 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 SERPINC1P01008 464 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 ALDOAP04075 364 aaKnown RBP2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 ASNSP08243 561 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 CYP3A4P08684 503 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 ALDOCP09972 364 aaKnown RBP2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 FAM86B2P0C5J1 330 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 RFPL3SP0C7P2 107 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 RSPH10BP0C881 870 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 POLR2MP0CAP2 368 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 SFPQP23246 707 aaKnown RBP eCLIP2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 PRPH2P23942 346 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 RPS12P25398 132 aaKnown RBP2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 DUSP1P28562 367 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 SLC8A1P32418 973 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 EPHX2P34913 555 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 IDUAP35475 653 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 NOVP48745 357 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 CLK3P49761 638 aaKnown RBP2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 CDK7P50613 346 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 PSMC6P62333 389 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 TPM4P67936 248 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 ZXDAP98168 799 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 MPP1Q00013 466 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 TLE3Q04726 772 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 GALNT2Q10471 571 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 MAPK7Q13164 816 aa2.87□□□□□ -1.95
CKS1BP7-201ENST00000522230 TNFAIP1Q13829 316 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms