RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ARL5AQ9Y689 179 aa21.47■■□□□ 1.03
R3HCC1-208ENST00000522012 A0A0J9YYE9 177 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 TCRBV9S1A1TA0A576 114 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 RNF40O75150 1001 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 CRTAMO95727 393 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 IL1BP01584 269 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 TRBC1P01850 177 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 SLC4A1P02730 911 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 CHRM1P11229 460 aaPredicted RBP21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 STX2P32856 288 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 HNF1BP35680 557 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 MRPS21P82921 87 aaKnown RBP21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 FBXO43Q4G163 708 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 TRMT11Q7Z4G4 463 aaKnown RBP21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 TXNDC5Q8NBS9 432 aaKnown RBP21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 MDGA1Q8NFP4 955 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 PIP4K2CQ8TBX8 421 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 RUFY1Q96T51 708 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 CCDC77Q9BR77 488 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 MAGEE1Q9HCI5 957 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 PPANQ9NQ55 473 aaKnown RBP21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 SLC2A6Q9UGQ3 507 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 RABGEF1Q9UJ41 708 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 KCTD3Q9Y597 815 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 FAM169AQ9Y6X4 670 aa21.46■■□□□ 1.03
R3HCC1-208ENST00000522012 MROH6A6NGR9 719 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 AURKAO14965 403 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 LDB2O43679 373 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 BUD23O43709 281 aaKnown RBP21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 PRKCQQ04759 706 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 CAMK2GQ13555 558 aaPredicted RBP21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 TAF1AQ15573 450 aaPredicted RBP21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 TSTD2Q5T7W7 516 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 ARMC3Q5W041 872 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 ESRP1Q6NXG1 681 aaKnown RBP21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 TRMT10BQ6PF06 316 aaKnown RBP21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 LRIG3Q6UXM1 1119 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 USP45Q70EL2 814 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 NLRP9Q7RTR0 991 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 MMAAQ8IVH4 418 aaKnown RBP21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 ACBD3Q9H3P7 528 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 HACD3Q9P035 362 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 DKK3Q9UBP4 350 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 WNT16Q9UBV4 365 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 NFS1Q9Y697 457 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 MIA3Q5JRA6 1907 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 A0A0U1RQS6 177 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 ZCWPW2A0A1B0GU75 182 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 C2orf81A6NN90 581 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 C16orf96A6NNT2 1141 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 A8MX80 341 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 XPAP23025 273 aaPredicted RBP21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 PSMD8P48556 350 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 EIF3BP55884 814 aaKnown RBP21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 CCINQ13939 588 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 STAT4Q14765 748 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 STARD3Q14849 445 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 SMAD1Q15797 465 aaKnown RBP21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 CNGA3Q16281 694 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 LRRC73Q5JTD7 316 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 TTC7BQ86TV6 843 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 UNC5BQ8IZJ1 945 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 HCAR2Q8TDS4 363 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 SCRN2Q96FV2 425 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 SRPK1Q96SB4 655 aaKnown RBP21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 GABRG3Q99928 467 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 GPR63Q9BZJ6 419 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 ZNF711Q9Y462 761 aa21.45■■□□□ 1.02
R3HCC1-208ENST00000522012 MUC22E2RYF6 1773 aaPredicted RBP21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 EXOC1LA0A1B0GW35 172 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 TSPAN11A1L157 253 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 CAPN8A6NHC0 703 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 C1QTNF3-AMACRE9PGA6 284 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 RNASEH1O60930 286 aaKnown RBP21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 ADAM23O75077 832 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 PIAS1O75925 651 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 PAPSS2O95340 614 aaPredicted RBP21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 HOXB2P14652 356 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 TIMP2P16035 220 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 PAMP19021 973 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 METAP1P53582 386 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 SEMG2Q02383 582 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 UGP2Q16851 508 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 CEP85LQ5SZL2 805 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 RPLP0P6Q8NHW5 317 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 SPOCK2Q92563 424 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 PPP1R16AQ96I34 528 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 CYTH2Q99418 400 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 TRABDQ9H4I3 376 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 ACSS3Q9H6R3 686 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 DYRK4Q9NR20 520 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 TREX1Q9NSU2 369 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 C20orf96Q9NUD7 363 aaPredicted RBP21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 MOCS1Q9NZB8 636 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 IL1RAPL1Q9NZN1 696 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 PPIL1Q9Y3C6 166 aa21.44■■□□□ 1.02
R3HCC1-208ENST00000522012 SMIM23A6NLE4 172 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 UPK3BL1B0FP48 263 aa21.43■■□□□ 1.02
R3HCC1-208ENST00000522012 UPK3BL2E5RIL1 263 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms