RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SGSHP51688 502 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 ART1P52961 327 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 SMTNP53814 917 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 TMEM164Q5U3C3 297 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 JMJD6Q6NYC1 403 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 WDR93Q6P2C0 686 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 BRICD5Q6PL45 260 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 ZNF517Q6ZMY9 492 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 H2AFVQ71UI9 128 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 TAOK1Q7L7X3 1001 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 DENND1CQ8IV53 801 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 AHI1Q8N157 1196 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 KYQ8NBH2 561 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 PARD3BQ8TEW8 1205 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 KAT5Q92993 513 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 TTC17Q96AE7 1141 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 SNRNP40Q96DI7 357 aaKnown RBP7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 MS4A14Q96JA4 679 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 TAAR9Q96RI9 348 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 AGPAT1Q99943 283 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 ASF1BQ9NVP2 202 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 COMMD8Q9NX08 183 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 APEX2Q9UBZ4 518 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 SLCO3A1Q9UIG8 710 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 GGT7Q9UJ14 662 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 INTUQ9ULD6 942 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 PACSIN2Q9UNF0 486 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 NAALADL1Q9UQQ1 740 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 ZNF510Q9Y2H8 683 aa7.42□□□□□ -1.22
CTNNA1-227ENST00000521387 CUBNO60494 3623 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 A0A0A6YYK5 440 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 A0A1W2PQH9 124 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 A0A1W2PQU0 124 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 LRRIQ3A6PVS8 624 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 TMCO5BA8MYB1 307 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 LMO7DNF2Z398 122 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 HNRNPDLO14979 420 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 RAD51BO15315 384 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 SLC7A4O43246 635 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 ERLIN1O75477 346 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 MAP3K6O95382 1288 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 CYBBP04839 570 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 ATP5BP06576 529 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 TUBBP07437 444 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 HMBSP08397 361 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 VAV1P15498 845 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 CHRNB2P17787 502 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 PAFAH1B1P43034 410 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 RECQLP46063 649 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 DNA2P51530 1060 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 PMS2P54278 862 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 MRPS25P82663 173 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 TFAMQ00059 246 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 CYP24A1Q07973 514 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 CNTN1Q12860 1018 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 C14orf28Q4W4Y0 310 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 Q71RC1 249 aaPredicted RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 GPRIN1Q7Z2K8 1008 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 HDXQ7Z353 690 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 ZNF438Q7Z4V0 828 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 SLFN11Q7Z7L1 901 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 SCD5Q86SK9 330 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 VPS36Q86VN1 386 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 PARGQ86W56 976 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 TGIF2LYQ8IUE0 185 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 LRRC57Q8N9N7 239 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 SPATA4Q8NEY3 305 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 SLC20A1Q8WUM9 679 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 ELMO3Q96BJ8 720 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 ARHGEF26Q96DR7 871 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 KREMEN1Q96MU8 473 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 SMOQ99835 787 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 LRRC1Q9BTT6 524 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 LRRC61Q9BV99 259 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 GOLPH3Q9H4A6 298 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 TLR8Q9NR97 1041 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 TAS2R14Q9NYV8 317 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 GULP1Q9UBP9 304 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 CROTQ9UKG9 612 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 ZFR2Q9UPR6 939 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 COQ4Q9Y3A0 265 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 STYXL1Q9Y6J8 313 aa7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 OAS3Q9Y6K5 1087 aaKnown RBP7.41□□□□□ -1.22
CTNNA1-227ENST00000521387 FAM170AA1A519 330 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 TULP1O00294 542 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 GRID2O43424 1007 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 IL1BP01584 269 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 POLR2EP19388 210 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 KLK2P20151 261 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 GARTP22102 1010 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 HNRNPA2B1P22626 353 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 GNL1P36915 607 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 MXI1P50539 228 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 SLC7A5Q01650 507 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 POU5F1Q01860 360 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 ART3Q13508 389 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 RPS6KA1Q15418 735 aa7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 SNRNP35Q16560 246 aaKnown RBP7.4□□□□□ -1.22
CTNNA1-227ENST00000521387 C10orf120Q5SQS8 335 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms