RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 FEM1CQ96JP0 617 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 PPP1R2P1Q96PQ5 205 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 SMIM14Q96QK8 99 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 APOL2Q9BQE5 337 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 HDAC8Q9BY41 377 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 LRRC40Q9H9A6 602 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 EPB41L5Q9HCM4 733 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 GDF3Q9NR23 364 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 WHRNQ9P202 907 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 DKK3Q9UBP4 350 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 CHKBQ9Y259 395 aa15.41■□□□□ 0.06
LSM1-203ENST00000520755 AAR2Q9Y312 384 aaKnown RBP15.41■□□□□ 0.06
LSM1-203ENST00000520755 LOC285095A0A1B0GVY8 99 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 ERI2A8K979 691 aaKnown RBP15.4■□□□□ 0.06
LSM1-203ENST00000520755 SLC7A4O43246 635 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 PLRG1O43660 514 aaKnown RBP15.4■□□□□ 0.06
LSM1-203ENST00000520755 PGLSO95336 258 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 AGTP01019 485 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 XPAP23025 273 aaPredicted RBP15.4■□□□□ 0.06
LSM1-203ENST00000520755 DRG2P55039 364 aaKnown RBP15.4■□□□□ 0.06
LSM1-203ENST00000520755 GALNT3Q14435 633 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 ELF2Q15723 593 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 PLK5Q496M5 336 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 PMS2CLQ68D20 193 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 RANBP10Q6VN20 620 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 ARMCX6Q7L4S7 300 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 LPCAT2Q7L5N7 544 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 KDELC2Q7Z4H8 507 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 TTC7BQ86TV6 843 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 HOOK3Q86VS8 718 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 SPOCK2Q92563 424 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 ART4Q93070 314 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 FAM131CQ96AQ9 280 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 TBL1YQ9BQ87 522 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 DUSP15Q9H1R2 295 aaPredicted RBP15.4■□□□□ 0.06
LSM1-203ENST00000520755 C6orf106Q9H6K1 298 aaPredicted RBP15.4■□□□□ 0.06
LSM1-203ENST00000520755 ZDHHC18Q9NUE0 388 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 PIH1D1Q9NWS0 290 aaKnown RBP15.4■□□□□ 0.06
LSM1-203ENST00000520755 SHOC2Q9UQ13 582 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 PLXNB3Q9ULL4 1909 aa15.4■□□□□ 0.06
LSM1-203ENST00000520755 TBC1D3DA0A087WVF3 549 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 TBC1D3IA0A087WXS9 549 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 TBC1D3EA0A087X179 549 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 TBC1D3KA0A087X1G2 549 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 TBC1D3FA6NER0 549 aaPredicted RBP15.39■□□□□ 0.05
LSM1-203ENST00000520755 LRRC72A6NJI9 287 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 TBC1D3LB9A6J9 549 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 E7EVH7 732 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 GOLGA8MH3BSY2 632 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 SPINT1O43278 529 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 RHOBTB1O94844 696 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 CPP00450 1065 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 TBC1D3HP0C7X1 549 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 TIMP2P16035 220 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 NBL1P41271 181 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 ABL2P42684 1182 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 MAGEA3P43357 314 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 DHPSP49366 369 aaPredicted RBP15.39■□□□□ 0.05
LSM1-203ENST00000520755 CARSP49589 748 aaKnown RBP15.39■□□□□ 0.05
LSM1-203ENST00000520755 TAS2R38P59533 333 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 CDK18Q07002 472 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 MSLNQ13421 630 aaPredicted RBP15.39■□□□□ 0.05
LSM1-203ENST00000520755 MORF4L2Q15014 288 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 PTPRRQ15256 657 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 SLC1A5Q15758 541 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 SIRPB2Q5JXA9 342 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 TBC1D3GQ6DHY5 549 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 TBC1D3CQ6IPX1 549 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 BRAT1Q6PJG6 821 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 CAND1Q86VP6 1230 aaKnown RBP15.39■□□□□ 0.05
LSM1-203ENST00000520755 TBC1D3Q8IZP1 549 aaPredicted RBP15.39■□□□□ 0.05
LSM1-203ENST00000520755 AGGF1Q8N302 714 aaeCLIP15.39■□□□□ 0.05
LSM1-203ENST00000520755 MCUQ8NE86 351 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 LPCAT1Q8NF37 534 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 OR52K1Q8NGK4 314 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 OR2T34Q8NGX1 318 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 FBXO25Q8TCJ0 367 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 HCAR2Q8TDS4 363 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 PIH1D2Q8WWB5 315 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 HSPA12BQ96MM6 686 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 PWWP2AQ96N64 755 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 FSD1LQ9BXM9 530 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 CASS4Q9NQ75 786 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 RAB23Q9ULC3 237 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 SMG5Q9UPR3 1016 aaKnown RBP15.39■□□□□ 0.05
LSM1-203ENST00000520755 ITM2BQ9Y287 266 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 PCDHB9Q9Y5E1 797 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 MUC6Q6W4X9 2439 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 VPS13AQ96RL7 3174 aa15.39■□□□□ 0.05
LSM1-203ENST00000520755 GOLGA6CA6NDK9 693 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 GOLGA6BA6NDN3 693 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 UPK3BL1B0FP48 263 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 UPK3BL2E5RIL1 263 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 NEMP1O14524 444 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 PSMD3O43242 534 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 FSBPO95073 299 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 PCDH8O95206 1070 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 NDST3O95803 873 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 PRKCGP05129 697 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 GOLGA6DP0CG33 693 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms