RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 H0YJX3 145 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 M0QYT0 321 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 DENRO43583 198 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 NPHS1O60500 1241 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 ZNF623O75123 536 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 GSRP00390 522 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 ZCCHC18P0CG32 403 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 ERVK-10P10266 1014 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 GLDCP23378 1020 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 AKAP5P24588 427 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 PEX2P28328 305 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 HOXA11P31270 313 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 AQP4P55087 323 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 FOXK2Q01167 660 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 ADIGQ0VDE8 80 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 ART3Q13508 389 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 SLC12A1Q13621 1099 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 PSMD5Q16401 504 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 SOWAHAQ2M3V2 549 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 TMEM259Q4ZIN3 620 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 RAB6CQ53S08 254 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 DCAF6Q58WW2 860 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 CES4AQ5XG92 561 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 ELMSAN1Q6PJG2 1045 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 FRMD7Q6ZUT3 714 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 PIWIL4Q7Z3Z4 852 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 MAVSQ7Z434 540 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 KBTBD6Q86V97 674 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 FAM131BQ86XD5 332 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 SNX32Q86XE0 403 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 CCDC117Q8IWD4 279 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 SLC44A3Q8N4M1 653 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 ZNF781Q8N8C0 355 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 SMG8Q8ND04 991 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 SLC2A14Q8TDB8 520 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 TRPC4APQ8TEL6 797 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 LZICQ8WZA0 190 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 DCUN1D1Q96GG9 259 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 VPS39Q96JC1 886 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 SCYL1Q96KG9 808 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 SLC2A13Q96QE2 648 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 HAPLN3Q96S86 360 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 NPY6RQ99463 290 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 LGMNQ99538 433 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 GPR22Q99680 433 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 HNRNPABQ99729 332 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 TMEM175Q9BSA9 504 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 EFHD1Q9BUP0 239 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 HERC2P3Q9BVR0 1158 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 DUSP16Q9BY84 665 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 ACE2Q9BYF1 805 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 FOXQ1Q9C009 403 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 TRIM15Q9C019 465 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 C20orf27Q9GZN8 174 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 RAB6CQ9H0N0 254 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 TASP1Q9H6P5 420 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 ZNF395Q9H8N7 513 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 EFCAB1Q9HAE3 211 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 EML4Q9HC35 981 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 WDR6Q9NNW5 1121 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 C20orf96Q9NUD7 363 aaPredicted RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 OXSMQ9NWU1 459 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 MIOSQ9NXC5 875 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 TUBGCP4Q9UGJ1 667 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 CNOT11Q9UKZ1 510 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 TMCO1Q9UM00 188 aa8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 AAR2Q9Y312 384 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-223ENST00000520520 COL4A3Q01955 1670 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 WDR87Q6ZQQ6 2873 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 CARNS1A5YM72 827 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 E9PBE3 544 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 MATN2O00339 956 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 TRIM38O00635 465 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 ZNF195O14628 629 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 DCLK1O15075 740 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 TGM5O43548 720 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 KLHL41O60662 606 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 RNASEH1O60930 286 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 LILRB3O75022 631 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 ANXA9O76027 345 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 RECQL4O94761 1208 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 C2P06681 752 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 FAM200BP0CF97 657 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 KCNE1P15382 129 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 ME2P23368 584 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 PTPN3P26045 913 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 GRIA1P42261 906 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 RPL5P46777 297 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 SLC12A2P55011 1212 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 CRADDP78560 199 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 FOLH1Q04609 750 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 GALNT2Q10471 571 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 STX5Q13190 355 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 ZBTB6Q15916 424 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 LRRC23Q53EV4 343 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 SFT2D3Q587I9 215 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 RALGPS1Q5JS13 557 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 TCHHL1Q5QJ38 904 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 FSTL4Q6MZW2 842 aa8.69□□□□□ -1.02
CTNNA1-223ENST00000520520 KLC3Q6P597 504 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms