RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 SLC35F3Q8IY50 421 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 FSTL5Q8N475 847 aaPredicted RBP16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 PCDH19Q8TAB3 1148 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 CSPG4P5Q96PW8 444 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 DEF6Q9H4E7 631 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 ETNK2Q9NVF9 386 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 CTTNBP2NLQ9P2B4 639 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 PADI4Q9UM07 663 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 GPR34Q9UPC5 381 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 PCDHGC4Q9Y5F7 938 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 ADAMTS20P59510 1910 aa16.23■□□□□ 0.19
IGHV3-42-201ENST00000520410 LY6G6EA0A0G2JKS1 128 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 LMO7DNF2Z398 122 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 MYO1FO00160 1098 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 YY2O15391 372 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 EIF2S3P41091 472 aaKnown RBP16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 PEX5P50542 639 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 HK3P52790 923 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 MTM1Q13496 603 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 SPIDRQ14159 915 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 PERM1Q5SV97 790 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 AFMIDQ63HM1 303 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 RBM44Q6ZP01 1051 aaKnown RBP16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 POLNQ7Z5Q5 900 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 PLA2G15Q8NCC3 412 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 FGF11Q92914 225 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 NAT6Q93015 286 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 PDXPQ96GD0 296 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 ZNF599Q96NL3 588 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 CCDC3Q9BQI4 270 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 CLPBQ9H078 707 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 PCDH18Q9HCL0 1135 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 PNMA8BQ9ULN7 279 aaPredicted RBP16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 U3KQA8 63 aa16.22■□□□□ 0.19
IGHV3-42-201ENST00000520410 A0A087WV48 116 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 A0A087X0T9 212 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 FAM228BP0C875 321 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 PTMSP20962 102 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 KELP23276 732 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 CASP14P31944 242 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 HSPA9P38646 679 aaKnown RBP16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 MMP13P45452 471 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 TBC1D25Q3MII6 688 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 MARC1Q5VT66 337 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 HGSNATQ68CP4 663 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 TXNRD3NBQ6F5E7 133 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 ALKBH5Q6P6C2 394 aaKnown RBP16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 LIPIQ6XZB0 460 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 DPPA4Q7L190 304 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 TAF8Q7Z7C8 310 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 ARL10Q8N8L6 244 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 KYQ8NBH2 561 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 TPCN2Q8NHX9 752 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 ZNF564Q8TBZ8 553 aaPredicted RBP16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 SYN2Q92777 582 aaPredicted RBP16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 IQCDQ96DY2 449 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 NUS1Q96E22 293 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 PSKH2Q96QS6 385 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 WDR26Q9H7D7 661 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 NT5MQ9NPB1 228 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 B4GALT6Q9UBX8 382 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 CAPN11Q9UMQ6 739 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 SATB2Q9UPW6 733 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 ZFHX4Q86UP3 3567 aa16.21■□□□□ 0.19
IGHV3-42-201ENST00000520410 EME2A4GXA9 379 aaPredicted RBP16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 B4DGG1 531 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 AGRPO00253 132 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 MAP3K6O95382 1288 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 CYP2A6P11509 494 aaPredicted RBP16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 RBMS1P29558 406 aaKnown RBP16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 PCBP4P57723 403 aaKnown RBP16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 NSUN2Q08J23 767 aaKnown RBP eCLIP16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 RALGDSQ12967 914 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 MMRN1Q13201 1228 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 BIRC2Q13490 618 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 COL9A2Q14055 689 aaPredicted RBP16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 ARHGEF7Q14155 803 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 ISXQ2M1V0 245 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 CDCP2Q5VXM1 449 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 NYAP1Q6ZVC0 841 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 CACTIN-AS1Q8N1I8 211 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 KCTD6Q8NC69 237 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 OR56A4Q8NGH8 313 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 TEKT4Q8WW24 435 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 CTNNBL1Q8WYA6 563 aaPredicted RBP16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 CCDC74AQ96AQ1 378 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 ATXN7L3BQ96GX2 97 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 TBATAQ96M53 351 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 FCRL3Q96P31 734 aaPredicted RBP16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 NUDCD1Q96RS6 583 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 BOCQ9BWV1 1114 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 CYP4F12Q9HCS2 524 aa16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 MRPL40Q9NQ50 206 aaKnown RBP16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.2■□□□□ 0.18
IGHV3-42-201ENST00000520410 MYLKQ15746 1914 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 ASPMQ8IZT6 3477 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 GYPCP04921 128 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 TPM1P09493 284 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 CTPS1P17812 591 aa16.19■□□□□ 0.18
IGHV3-42-201ENST00000520410 VIPR1P32241 457 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms