RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 IGLON5A6NGN9 336 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 SIGLEC16A6NMB1 481 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 A6NNZ2 444 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 TERTO14746 1132 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 SCAMP1O15126 338 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 TSPAN6O43657 245 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 TLX3O43711 291 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 KDELR3O43731 214 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 RAMP2O60895 175 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 POP4O95707 220 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 GSRP00390 522 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 MT-CO3P00414 261 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 CALB1P05937 261 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 TPM2P07951 284 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 CKMT1AP12532 417 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 GPD1P21695 349 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 CDC25BP30305 580 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 NSFP46459 744 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 GEMIN4P57678 1058 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 COL9A2Q14055 689 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 FZD2Q14332 565 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 NCAPHQ15003 741 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 POLD3Q15054 466 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 ZNF805Q5CZA5 627 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 ZNF542PQ5EBM4 170 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 MON1BQ7L1V2 547 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 APTXQ7Z2E3 356 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 FAM181AQ8N9Y4 354 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 C3orf20Q8ND61 904 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 OR2AP1Q8NGE2 309 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 TTC9Q92623 222 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 NXPE2Q96DL1 559 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 SELENOOQ9BVL4 669 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 HSD3B7Q9H2F3 369 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 ANO10Q9NW15 660 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 PLXNB3Q9ULL4 1909 aa9.4□□□□□ -0.9
CTNNA1-221ENST00000520339 ARID1BQ8NFD5 2236 aaPredicted RBP9.4□□□□□ -0.91
CTNNA1-221ENST00000520339 LY6G6EA0A0G2JKS1 128 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 SPTY2D1-AS1A0A0U1RR47 76 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 ZSCAN5CA6NGD5 496 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 WASH4PA8MWX3 477 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 K7ESM1 405 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 AREL1O15033 823 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 FFAR2O15552 330 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 BUB1O43683 1085 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 B3GALT4O96024 378 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 CSF2P04141 144 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 MYF5P13349 255 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 NME1P15531 152 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 RABIFP47224 123 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 ZNF143P52747 638 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 PFN3P60673 137 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 HNRNPKP61978 463 aaKnown RBP eCLIP9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 SNRPD1P62314 119 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 UBXN1Q04323 297 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 SRSF11Q05519 484 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 SGCGQ13326 291 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 TPRG1LQ5T0D9 272 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 CDCP2Q5VXM1 449 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 LEKR1Q6ZMV7 388 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 SLCO4C1Q6ZQN7 724 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 PTAR1Q7Z6K3 402 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 SLFN11Q7Z7L1 901 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 PYROXD2Q8N2H3 581 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 RYBPQ8N488 228 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 RTL3Q8N8U3 475 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 NEK11Q8NG66 645 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 RHOVQ96L33 236 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 ERGIC2Q96RQ1 377 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 AGPAT1Q99943 283 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 OSBPL1AQ9BXW6 950 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 KLC2Q9H0B6 622 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 ZDHHC6Q9H6R6 413 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 DNAJC28Q9NX36 388 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 NLGN3Q9NZ94 848 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 HPCAL4Q9UM19 191 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 CLCA2Q9UQC9 943 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 ITM2BQ9Y287 266 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 MFHAS1Q9Y4C4 1052 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 U3KQA8 63 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 FREM2Q5SZK8 3169 aa9.39□□□□□ -0.91
CTNNA1-221ENST00000520339 SYCE3A1L190 88 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 GOLGA6L3A6NEY3 463 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 NEMP2A6NFY4 417 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 KRIT1O00522 736 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 NEMP1O14524 444 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 FPGTO14772 594 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 CCP110O43303 1012 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 OPA1O60313 960 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 NEBLO76041 1014 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 TMCC1O94876 653 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 UGT2B4P06133 528 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 ALPPL2P10696 532 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 ESRRAP11474 423 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 EPHA1P21709 976 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 ITPKBP27987 946 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 EPHB2P29323 1055 aa9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 EIF2S3P41091 472 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 YBEYP58557 167 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-221ENST00000520339 RPL7AP62424 266 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms