RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 GOLGA7BQ2TAP0 167 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 DEFB109BQ30KR1 87 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 EDRF1Q3B7T1 1238 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 C14orf28Q4W4Y0 310 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 ZFYVE27Q5T4F4 411 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 ACBD5Q5T8D3 534 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 CEP135Q66GS9 1140 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 RAP1GAP2Q684P5 730 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 KRT39Q6A163 491 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 CXorf57Q6NSI4 855 aaKnown RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 C20orf204Q6ZNR8 217 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 C8orf86Q6ZUL3 223 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 HPS6Q86YV9 775 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 IQUBQ8NA54 791 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 ATP11CQ8NB49 1132 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 KIAA1524Q8TCG1 905 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 DQX1Q8TE96 717 aaKnown RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 JPH3Q8WXH2 748 aaPredicted RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 SEC14L1Q92503 715 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 CENPTQ96BT3 561 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 TMX3Q96JJ7 454 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 HSFY1Q96LI6 401 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 C5orf34Q96MH7 638 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 SLC30A3Q99726 388 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 C7orf25Q9BPX7 421 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 CEP44Q9C0F1 390 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 MUC3BQ9H195 1237 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 APOBEC3GQ9HC16 384 aaKnown RBP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 TMEM8AQ9HCN3 771 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.95□□□□□ -1.62
SDCBP-207ENST00000520168 SIRPGQ9P1W8 387 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 PILRAQ9UKJ1 303 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 POLHQ9Y253 713 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 KCNMB2Q9Y691 235 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 FBN3Q75N90 2809 aa4.95□□□□□ -1.62
SDCBP-207ENST00000520168 IGLON5A6NGN9 336 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 TULP2O00295 520 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 CASC3O15234 703 aaKnown RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 INPP4BO15327 924 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 NKX2-8O15522 239 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 CREB3O43889 395 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 STX10O60499 249 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 LRCH4O75427 683 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 TM7SF2O76062 418 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 RHOBTB3O94955 611 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 RECKO95980 971 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 NR3C1P04150 777 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 PRKAR1AP10644 381 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 VDRP11473 427 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 FGF3P11487 239 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 KRT13P13646 458 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 LCP1P13796 627 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 GJB2P29033 226 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 OAS2P29728 719 aaKnown RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 CCR1P32246 355 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 CSTF2P33240 577 aaKnown RBP eCLIP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 IGFALSP35858 605 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 SSR1P43307 286 aaKnown RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 GPR3P46089 330 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 VAMP7P51809 220 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 LIMK2P53671 638 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 CDH4P55283 916 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 SLC20A2Q08357 652 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 MAP7Q14244 749 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 HLTFQ14527 1009 aaKnown RBP eCLIP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 NR1D2Q14995 579 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 NFIL3Q16649 462 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 EFHC1Q5JVL4 640 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 TPRG1LQ5T0D9 272 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 RETSATQ6NUM9 610 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 C22orf39Q6P5X5 142 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 OGFOD3Q6PK18 319 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 LCLAT1Q6UWP7 414 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 CEACAM20Q6UY09 585 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 CAPN12Q6ZSI9 719 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 TMPRSS9Q7Z410 1059 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 SETD3Q86TU7 594 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 APLFQ8IW19 511 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 PCDH20Q8N6Y1 951 aaKnown RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 Q8N9G6 341 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 DCAF4L2Q8NA75 395 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 FBXL13Q8NEE6 735 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 OR4D9Q8NGE8 314 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 GRIN3AQ8TCU5 1115 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 TAS1R2Q8TE23 839 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 STARD8Q92502 1023 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 NDRG1Q92597 394 aaKnown RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 ELMO3Q96BJ8 720 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 MYEOVQ96EZ4 313 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 ALG14Q96F25 216 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 RPRD1AQ96P16 312 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 RBM15Q96T37 977 aaKnown RBP eCLIP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 PRMT1Q99873 361 aaKnown RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 HEPHQ9BQS7 1158 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 OSBPL1AQ9BXW6 950 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 TCEAL2Q9H3H9 227 aaPredicted RBP4.94□□□□□ -1.62
SDCBP-207ENST00000520168 SEMA6CQ9H3T2 930 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 CYP4F12Q9HCS2 524 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 CASS4Q9NQ75 786 aa4.94□□□□□ -1.62
SDCBP-207ENST00000520168 ZNF358Q9NW07 568 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms