RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 LIPIQ6XZB0 460 aa12.8□□□□□ -0.36
MCPH1-202ENST00000519221 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
MCPH1-202ENST00000519221 ATL2Q8NHH9 583 aa12.8□□□□□ -0.36
MCPH1-202ENST00000519221 PCDH19Q8TAB3 1148 aa12.8□□□□□ -0.36
MCPH1-202ENST00000519221 RFFLQ8WZ73 363 aa12.8□□□□□ -0.36
MCPH1-202ENST00000519221 TSGA13Q96PP4 275 aa12.8□□□□□ -0.36
MCPH1-202ENST00000519221 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
MCPH1-202ENST00000519221 MBNL1Q9NR56 388 aaKnown RBP12.8□□□□□ -0.36
MCPH1-202ENST00000519221 SPASTQ9UBP0 616 aa12.8□□□□□ -0.36
MCPH1-202ENST00000519221 K7ESM1 405 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 MATN3O15232 486 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 FFAR2O15552 330 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 AQP9O43315 295 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 MFSD11O43934 449 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 GP1BAP07359 652 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 ELFN1P0C7U0 828 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 JUPP14923 745 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 CCNCP24863 283 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 HTR1BP28222 390 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 GJC1P36383 396 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 SLC1A1P43005 524 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 BLKP51451 505 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 PPARDQ03181 441 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 CAMK2BQ13554 666 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 MESDQ14696 234 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 LRRC38Q5VT99 294 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 ALG1LQ6GMV1 187 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 PHACTR4Q8IZ21 702 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 SDR16C5Q8N3Y7 309 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 PGBD5Q8N414 524 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 MAML1Q92585 1016 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 SLC13A1Q9BZW2 595 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 POLR1EQ9GZS1 481 aaKnown RBP12.79□□□□□ -0.36
MCPH1-202ENST00000519221 CCDC86Q9H6F5 360 aaKnown RBP12.79□□□□□ -0.36
MCPH1-202ENST00000519221 NOD2Q9HC29 1040 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 SPTLC3Q9NUV7 552 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 APOBEC3BQ9UH17 382 aaKnown RBP12.79□□□□□ -0.36
MCPH1-202ENST00000519221 KLF15Q9UIH9 416 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 SALL4Q9UJQ4 1053 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 PHTF1Q9UMS5 762 aa12.79□□□□□ -0.36
MCPH1-202ENST00000519221 ZZEF1O43149 2961 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 ZFC3H1O60293 1989 aaKnown RBP12.78□□□□□ -0.36
MCPH1-202ENST00000519221 LMO7DNF2Z398 122 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 RECQL5O94762 991 aaPredicted RBP12.78□□□□□ -0.36
MCPH1-202ENST00000519221 CPP00450 1065 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 PRKCGP05129 697 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 HOXC4P09017 264 aaPredicted RBP12.78□□□□□ -0.36
MCPH1-202ENST00000519221 KRT10P13645 584 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 KDELR1P24390 212 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 INPP5AQ14642 412 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 NFATC4Q14934 902 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 ZFYVE27Q5T4F4 411 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 ARMC12Q5T9G4 340 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 PROSER1Q86XN7 944 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 CPNE8Q86YQ8 564 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 NDUFAF2Q8N183 169 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 FSTL5Q8N475 847 aaPredicted RBP12.78□□□□□ -0.36
MCPH1-202ENST00000519221 PQLC3Q8N755 202 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 LMX1AQ8TE12 382 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 GLMNQ92990 594 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 HDAC11Q96DB2 347 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 APOLD1Q96LR9 279 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 NSMCE3Q96MG7 304 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 ZNF830Q96NB3 372 aaPredicted RBP12.78□□□□□ -0.36
MCPH1-202ENST00000519221 RNF157Q96PX1 679 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 IL12RB2Q99665 862 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 APOOQ9BUR5 198 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 B4GALT6Q9UBX8 382 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 COQ6Q9Y2Z9 468 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 PPIL1Q9Y3C6 166 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 PCDHGC4Q9Y5F7 938 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 FREM2Q5SZK8 3169 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 ZFYVE26Q68DK2 2539 aa12.78□□□□□ -0.36
MCPH1-202ENST00000519221 DSPP15924 2871 aaKnown RBP12.77□□□□□ -0.36
MCPH1-202ENST00000519221 LRRD1A4D1F6 860 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 TRABD2BA6NFA1 517 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 SRRM3A6NNA2 597 aaPredicted RBP12.77□□□□□ -0.37
MCPH1-202ENST00000519221 PSMD11O00231 422 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 RASGRP1O95267 797 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 PGLSO95336 258 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 CYP2A6P11509 494 aaPredicted RBP12.77□□□□□ -0.37
MCPH1-202ENST00000519221 KELP23276 732 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 VIPR1P32241 457 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 TRIM23P36406 574 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 RPIAP49247 311 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 HK3P52790 923 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 HADHBP55084 474 aaKnown RBP12.77□□□□□ -0.37
MCPH1-202ENST00000519221 KIAA1024LP59773 190 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 MAXP61244 160 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 TRAF2Q12933 501 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 ELOCQ15369 112 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 PRRT3Q5FWE3 981 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 FAXCQ5TGI0 409 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 HES3Q5TGS1 186 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 ESRP1Q6NXG1 681 aaKnown RBP12.77□□□□□ -0.37
MCPH1-202ENST00000519221 LVRNQ6Q4G3 990 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 KDM7AQ6ZMT4 941 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 USP45Q70EL2 814 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 TC2NQ8N9U0 490 aa12.77□□□□□ -0.37
MCPH1-202ENST00000519221 PDCD6IPQ8WUM4 868 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms