RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 FBXL14Q8N1E6 418 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 IQCF1Q8N6M8 205 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 AGBL3Q8NEM8 1001 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 FAM216AQ8WUB2 273 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 UCMAQ8WVF2 138 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 PHF21BQ96EK2 531 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 LYZL4Q96KX0 146 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 ZNF570Q96NI8 536 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 NAP1L5Q96NT1 182 aaPredicted RBP3.79□□□□□ -1.8
VPS13B-207ENST00000518569 PIP5K1AQ99755 562 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 SLC25A33Q9BSK2 321 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 SMC4Q9NTJ3 1288 aa3.79□□□□□ -1.8
VPS13B-207ENST00000518569 ORC3Q9UBD5 711 aaPredicted RBP3.79□□□□□ -1.8
VPS13B-207ENST00000518569 AAR2Q9Y312 384 aaKnown RBP3.79□□□□□ -1.8
VPS13B-207ENST00000518569 KRTAP29-1A8MX34 341 aaPredicted RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 PAGE4O60829 102 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 SEC31AO94979 1220 aaKnown RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 ALPLP05186 524 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 SPARCP09486 303 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 SNHG28P0DPA3 235 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 DDX5P17844 614 aaKnown RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 ITGB6P18564 788 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 RPL3P39023 403 aaKnown RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 RGS2P41220 211 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 MXI1P50539 228 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 ECT2LQ008S8 904 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 DCTN2Q13561 401 aaKnown RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 MAPRE1Q15691 268 aaKnown RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 USP41Q3LFD5 358 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 DPCR1Q3MIW9 517 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 PPP6R3Q5H9R7 873 aaPredicted RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 C6orf141Q5SZD1 244 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 FAM180BQ6P0A1 224 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 CRELD2Q6UXH1 353 aaPredicted RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 C1orf122Q6ZSJ8 110 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 SHFQ7M4L6 423 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 CPLX4Q7Z7G2 160 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 TDRPQ86YL5 185 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 WDR63Q8IWG1 891 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 ADSSL1Q8N142 457 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 OR14A16Q8NHC5 309 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 ARRDC2Q8TBH0 407 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 ELP5Q8TE02 316 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 PSPC1Q8WXF1 523 aaKnown RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 GTF3C6Q969F1 213 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 SMARCE1Q969G3 411 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 MIB2Q96AX9 1013 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 INTS12Q96CB8 462 aaKnown RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 SLC41A2Q96JW4 573 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 PKNOX2Q96KN3 472 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 FAM110AQ9BQ89 295 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 TMEM204Q9BSN7 226 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 DDX4Q9NQI0 724 aaKnown RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 SLC6A13Q9NSD5 602 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 CISD1Q9NZ45 108 aaKnown RBP3.78□□□□□ -1.8
VPS13B-207ENST00000518569 CAPN7Q9Y6W3 813 aa3.78□□□□□ -1.8
VPS13B-207ENST00000518569 TTC3P53804 2025 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 A0A0U1RQJ8 604 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 DYTNA2CJ06 578 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 TMEM202A6NGA9 273 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 EIF3CLB5ME19 914 aaKnown RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 J3KR12 359 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 BCAT2O15382 392 aaPredicted RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 HSPA12AO43301 675 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 KCNAB3O43448 404 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 SMAD6O43541 496 aaKnown RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 USO1O60763 962 aaKnown RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 SERPINI2O75830 405 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 GAGE7O76087 117 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 SCGB1D1O95968 90 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 GAGE12FP0CL80 117 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 GAGE12GP0CL81 117 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 GAGE12IP0CL82 117 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 LAMP2P13473 410 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 CDH2P19022 906 aaPredicted RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 CAPN3P20807 821 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 CDKN2AP42771 156 aaKnown RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 PIP4K2AP48426 406 aaPredicted RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 THBS3P49746 956 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 GEMIN4P57678 1058 aaKnown RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 RPS3AP61247 264 aaKnown RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 DCAF7P61962 342 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 TMEM115Q12893 351 aaPredicted RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 GAGE1Q13065 139 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 GAGE4Q13068 117 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 FGFBP1Q14512 234 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 TBC1D1Q86TI0 1168 aaPredicted RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 ZDHHC17Q8IUH5 632 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 SLC35F3Q8IY50 421 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 SAMD14Q8IZD0 417 aaPredicted RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 CNTROBQ8N137 903 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 CLIP4Q8N3C7 705 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 NGEFQ8N5V2 710 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 NEXN-AS1Q8NBZ9 246 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 HUS1BQ8NHY5 278 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 ADAMTS14Q8WXS8 1223 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 PABPC5Q96DU9 382 aaKnown RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 SH3GL2Q99962 352 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 WACQ9BTA9 647 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 MUC13Q9H3R2 512 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms