RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 ICE1Q9Y2F5 2266 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 TSPAN11A1L157 253 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 GOLGA6L4A6NEF3 574 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 CPNE6O95741 557 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 PRKCGP05129 697 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 UGT1A3P35503 534 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 MMP12P39900 470 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 MAZP56270 477 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 OR1D5P58170 312 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 RAD51Q06609 339 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 MTM1Q13496 603 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 UGP2Q16851 508 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 CDO1Q16878 200 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 C15orf59Q2T9L4 293 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 AMZ1Q400G9 498 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 TMEM164Q5U3C3 297 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 SPECC1LQ69YQ0 1117 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 PIM3Q86V86 326 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 ZSWIM9Q86XI8 627 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 ELOA2Q8IYF1 753 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 OR56A4Q8NGH8 313 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 ATL2Q8NHH9 583 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 HMCESQ96FZ2 354 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 PSMG3-AS1Q96PY0 264 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 DPEP2Q9H4A9 486 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 RETREG1Q9H6L5 497 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 LHX3Q9UBR4 397 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 TUBD1Q9UJT1 453 aa11.42□□□□□ -0.58
CTNNA1-205ENST00000517904 CRYBG3Q68DQ2 2970 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 LRBAP50851 2863 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 IGHV5-10-1A0A0J9YXX1 117 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 GTPBP10A4D1E9 387 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 ZSCAN5CA6NGD5 496 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 HGSO14964 777 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 CYP11B1P15538 503 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 XPAP23025 273 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 ATP1A2P50993 1020 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 SUOXP51687 545 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 KIAA1024LP59773 190 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 CCDC14Q49A88 953 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 INO80DQ53TQ3 878 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 TAF3Q5VWG9 929 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 DPY19L2P1Q6NXN4 242 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 ARCQ7LC44 396 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 ZNF438Q7Z4V0 828 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 C17orf82Q86X59 251 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 ZNF354CQ86Y25 554 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 CREBRFQ8IUR6 639 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 PELI3Q8N2H9 469 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 IL22RA1Q8N6P7 574 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 CCDC185Q8N715 623 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 CASKIN2Q8WXE0 1202 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 TBC1D31Q96DN5 1066 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 CCDC74BQ96LY2 380 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 TAAR9Q96RI9 348 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 LGR4Q9BXB1 951 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 PDCL3Q9H2J4 239 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 ZNF71Q9NQZ8 489 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 METTL5Q9NRN9 209 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 SPATS2LQ9NUQ6 558 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 ANAPC2Q9UJX6 822 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 DAAM1Q9Y4D1 1078 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 PCDHGA3Q9Y5H0 932 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 B3GALT1Q9Y5Z6 326 aa11.41□□□□□ -0.58
CTNNA1-205ENST00000517904 CELSR2Q9HCU4 2923 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 CACNB4O00305 520 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 BUB1BO60566 1050 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 RECQL5O94762 991 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 PLEKP08567 350 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 GM2AP17900 193 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 CD1CP29017 333 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 ALDH4A1P30038 563 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 CCR10P46092 362 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 RALGDSQ12967 914 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 NR1D2Q14995 579 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 CYTH1Q15438 398 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 SMYD5Q6GMV2 418 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 NRROSQ86YC3 692 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 FAM26EQ8N5C1 309 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 GPT2Q8TD30 523 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 HCAR2Q8TDS4 363 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 CPA5Q8WXQ8 436 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 NCAPGQ9BPX3 1015 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 CDH19Q9H159 772 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 SUV39H2Q9H5I1 410 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 CYP4F12Q9HCS2 524 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 AKAP7Q9P0M2 348 aaPredicted RBP11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 PLAAQ9Y263 795 aa11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 TEP1Q99973 2627 aaKnown RBP11.4□□□□□ -0.58
CTNNA1-205ENST00000517904 RP1L1Q8IWN7 2480 aaPredicted RBP11.4□□□□□ -0.59
CTNNA1-205ENST00000517904 TNFRSF10CO14798 259 aa11.39□□□□□ -0.59
CTNNA1-205ENST00000517904 NKX2-8O15522 239 aa11.39□□□□□ -0.59
CTNNA1-205ENST00000517904 DUX1O43812 170 aa11.39□□□□□ -0.59
CTNNA1-205ENST00000517904 FGFR1OPO95684 399 aaKnown RBP11.39□□□□□ -0.59
CTNNA1-205ENST00000517904 LSM8O95777 96 aaKnown RBP11.39□□□□□ -0.59
CTNNA1-205ENST00000517904 FGF1P05230 155 aa11.39□□□□□ -0.59
CTNNA1-205ENST00000517904 TRIM23P36406 574 aa11.39□□□□□ -0.59
CTNNA1-205ENST00000517904 HDAC4P56524 1084 aa11.39□□□□□ -0.59
CTNNA1-205ENST00000517904 BPIFB4P59827 614 aa11.39□□□□□ -0.59
CTNNA1-205ENST00000517904 NOMO3P69849 1222 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms