RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 IKZF5Q9H5V7 419 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 PPANQ9NQ55 473 aaKnown RBP-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 FSCN3Q9NQT6 498 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 ABCD2Q9UBJ2 740 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 SERPINB13Q9UIV8 391 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 CDH22Q9UJ99 828 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 RAB26Q9ULW5 256 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZNF510Q9Y2H8 683 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 KLHL20Q9Y2M5 609 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 CDC42BPBQ9Y5S2 1711 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 MEGF6O75095 1541 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 LAMB2P55268 1798 aa-0.85□□□□□ -2.55
RNU6-539P-201ENST00000516665 CHL1O00533 1208 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 SNX2O60749 519 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 CTSVO60911 334 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 WDR1O75083 606 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 TMCC1O94876 653 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 THP07101 528 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 ALDOCP09972 364 aaKnown RBP-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 MYOD1P15172 320 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 DRD1P21728 446 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 STAT1P42224 750 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 METAP2P50579 478 aaKnown RBP eCLIP-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 GSCP56915 257 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 CD300CQ08708 224 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 CAMK1Q14012 370 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 CNN3Q15417 329 aaKnown RBP-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 COL28A1Q2UY09 1125 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 GTDC1Q4AE62 458 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 ARMCX5Q6P1M9 558 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 CNNM4Q6P4Q7 775 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 ADAMTSL2Q86TH1 951 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZC3HC1Q86WB0 502 aaKnown RBP-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZNF354CQ86Y25 554 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 MMAAQ8IVH4 418 aaKnown RBP-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZDHHC23Q8IYP9 409 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 TMEM61Q8N0U2 210 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 SUN3Q8TAQ9 357 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 RNF138Q8WVD3 245 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 COA7Q96BR5 231 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 LMBRD1Q9NUN5 540 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 ERAP1Q9NZ08 941 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 PADI1Q9ULC6 663 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 PAM16Q9Y3D7 125 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 OR2W1Q9Y3N9 320 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 STYXL1Q9Y6J8 313 aa-0.86□□□□□ -2.55
RNU6-539P-201ENST00000516665 TCRBV7S3A2A0A539 114 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 DDTLA6NHG4 134 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 MAGEB17A8MXT2 336 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 KIF3BO15066 747 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 SYNGR3O43761 229 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 TRMUO75648 421 aaKnown RBP-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 RFPL3O75679 317 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 MMP3P08254 477 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZNF823P16415 610 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 S1PR1P21453 382 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 RFC1P35251 1148 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 ETV5P41161 510 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 TERF1P54274 439 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 B3GALT5-AS1P59052 145 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 ISL1P61371 349 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 ARID5AQ03989 594 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 EIF4EBP1Q13541 118 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 PLS1Q14651 629 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 INSCQ1MX18 579 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 SYTL3Q4VX76 610 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 KHDC1LQ5JSQ8 128 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 AGBL2Q5U5Z8 902 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 C16orf89Q6UX73 402 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZNF841Q6ZN19 808 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 ASB18Q6ZVZ8 466 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 SERPINA11Q86U17 422 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 KLBQ86Z14 1044 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 MPP5Q8N3R9 675 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 PPP1R9BQ96SB3 815 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 PNPOQ9NVS9 261 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 RNF186Q9NXI6 227 aa-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZFP37Q9Y6Q3 630 aaPredicted RBP-0.87□□□□□ -2.55
RNU6-539P-201ENST00000516665 IGHV4-4A0A075B6R2 117 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 IGKV2D-24A0A075B6R9 120 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 A0A0A0MQY5 61 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 C17orf102A2RUQ5 167 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 PINLYPA6NC86 204 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 CAPN8A6NHC0 703 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 ZNF233A6NK53 670 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 SHISA7A6NL88 538 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 AP2A2O94973 939 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 CD34P28906 385 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 ARHGAP8P85298 464 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 HNRNPDQ14103 355 aaKnown RBP-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 KCNAB1Q14722 419 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 FASTKD3Q14CZ7 662 aaKnown RBP-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 KRTAP21-3Q3LHN1 58 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 LMBRD2Q68DH5 695 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 FAM171BQ6P995 826 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 Q6ZRP5 223 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 RASGRP3Q8IV61 690 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 CCDC105Q8IYK2 499 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 OR56A3Q8NH54 315 aa-0.88□□□□□ -2.55
RNU6-539P-201ENST00000516665 ARRDC2Q8TBH0 407 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms